Euzebya pacifica: DVS28_a0466
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Entry
DVS28_a0466 CDS
T05999
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
euz
Euzebya pacifica
Pathway
euz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
euz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DVS28_a0466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
euz03400
]
DVS28_a0466
Enzymes [BR:
euz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DVS28_a0466
DNA repair and recombination proteins [BR:
euz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DVS28_a0466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Mmc1_N
Motif
Other DBs
NCBI-ProteinID:
AXV05173
UniProt:
A0A346XSH6
LinkDB
All DBs
Position
574514..577885
Genome browser
AA seq
1123 aa
AA seq
DB search
MLEVTRGATGDVLVGALADVLATPLPDPMAREHVVVHSHGIERWISQHLGLRLGATGRAD
GVCANVAFPSPSEVVADVMRAAGADPLAVRAWQPASLTWRLLDLVDRGLPAAAQPLAART
EAAGDRRLVPLGLLAQQLHRYAVHRPDMVLDWLDGGSSDGAGRDLDDADAWQAAVVRLLA
ADIDRPAFPQQVVDTVAALDAGAPTPPGLQRLALFGFTAIPSTQLAVLAALARRIDVHLL
LLHPSAADWAAVHDVAGAVDDRGLPILPARRDVALPAPRNRLLRAWGRDVRELQVVVQTV
ADGVHDVDADTADTLAMRPTILQRLQRAVRTDAPLDGATGTVEPDPSVQLHACPGRARQV
QVLRDEILRVMAADPTIRPRDIIVMCPDVEAFAPLVAAHLAGGGSAADSRPDLRVRLADR
SLRQTNPILRLLDEVLDLAATRVTASRLLDLLAADPVRRRFGFDADDLEDIGSWLERAGV
RWGVDAAERSRFGLDGVRHNTLDEGLDRLLLGVAMADEGDRTLGGITPYDDIEGTGVRTV
GRLAEVGNRLAALLPQLRTARPVDAWVDLLGMVVDQLGLASRDEPWQRTELTGLLRELAD
SADGLSTDVALNEVRDLLADRLRGRPSRANHMTGDLTVCTLVPMRSVPHRVVCLLGMDDG
VFPRTARPHVDDLIARAPRVGDHDPRTEDRQLLLDAVASASDHLIVTWTGQEERSDEAVP
PCVPVAELMRAVDQLAPGADRPLSDRLTTRHPRYAHDPAAFDPDGRPGFDQLAHRAAAAT
VSADDAGRALLPPPEDDDVDLAALSRFAIDPATTFVREALGIWVPDDPEAPDENVPVELD
GLEGWKVGQALLAVSPSDTEALDGVVAAARGRGLLPPPELRPGKVNTIPVMVEELRAHCA
QIGVPANGSGNHVAVDIAVDRWRVHGAVSGVVGDRIVDVSYSRLTGKRLMRAWIDLLALT
VQDPERPWESVVVGRDKVQRKDVASSRRIDPLAPSADRRLELATGFLGDLLQLRHDGLRE
PLIVPSETAHAYAKARVVDHEASEEADNTACKAWDPHPMGFSSDCGRPAHVLLLGDVHTY
DRLTREPPRPADERLGMAAEPHRFGALAMRLWAPLLQRLGGHR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtgacgcggggtgcgaccggtgacgtcctggtgggggcgctggccgacgtg
ctcgcaaccccgctgcccgacccgatggcccgcgagcacgtcgtggtccacagccacggc
atcgaacgctggatcagccagcacctcggcctgcgactcggggcgaccggtcgggccgac
ggggtctgcgccaacgtggcgttcccctcgccgtcggaggtggtcgccgacgtcatgcgt
gcggcgggggccgatccgctcgcggtcagggcatggcagcccgcgtcgttgacgtggcgg
ctgctggacctcgtcgaccgcgggctgcccgcggccgctcaacccctcgcggcccggacc
gaggcggccggcgaccggcgcctcgtgccgctgggcctgctcgcccagcagctgcaccgt
tacgccgtccaccggcccgacatggtgctcgactggctggacgggggctccagcgacggt
gccggaagggacctggacgacgccgacgcgtggcaggcagcggtcgtgcgcctgctcgcc
gccgacatcgaccgaccggcgttccctcagcaggtggttgacaccgtcgccgccctcgac
gccggggcgccgacacccccggggttgcagcgcctcgccctgttcgggttcaccgccatc
ccctccacgcagctggcggtcctggcggcgctcgcccggcgcatcgatgtgcacctgctg
ctgctccacccctccgcggcggactgggcagcggtgcacgacgtcgccggtgccgtcgac
gatcgtggcctgccgatcctcccggcccgtcgggacgtcgcgttgccggccccccgcaac
cgcctgctgcgggcctggggtcgggacgtgcgcgagctgcaggtcgtcgtgcagaccgtc
gccgacggtgtacatgacgtcgacgccgacaccgccgacaccctcgcgatgcgtccgacg
atcctccagcggctgcaacgcgccgtccggaccgatgcgcccctcgacggggccaccggg
accgtggaaccggatccgagcgtgcagctgcacgcctgcccgggccgggcccggcaggtc
caggtcctgcgcgacgagatcctgcgggtcatggcggccgacccgacgatccgcccgcgc
gacatcatcgtcatgtgtcccgacgtcgaggccttcgccccgctggtcgcggcacacctg
gcagggggaggcagcgcggccgacagccgccccgacctgcgcgtccggctggccgaccga
tcgctgcggcagaccaacccgatcctgcggctgctcgacgaggtgctggacctcgcggcc
acacgcgtcaccgccagccgcctgctggacctgctggccgccgaccccgtgcgtcgccgg
ttcggcttcgacgccgacgacctcgaggacatcggctcgtggctggaacgggccggggtg
cgctggggcgtcgacgctgccgagcggtcacggttcggcctggacggcgtgcgccacaac
accctcgacgagggactcgaccggctgctgctcggcgtggccatggccgacgagggcgac
cggaccctcggcgggatcaccccctacgacgacatcgagggcaccggtgtgcgtaccgtc
ggccgcctggccgaggtcggcaaccggctggccgccctgctgccgcagctgcgcaccgcc
cgtcccgtcgatgcctgggtcgacctgctcgggatggtcgtcgaccagctcggcctggcg
tcccgggacgagccgtggcagcggaccgagctgaccggcctgctgcgcgagctggccgac
agcgccgacgggctgtcgacggacgtggccctcaacgaggtccgcgacctgctggccgac
cggctgcgtggccggcccagccgcgccaaccacatgaccggcgacctgaccgtctgcacg
ctcgtgccgatgcggtcggtgccccaccgcgtggtctgcctgctcggcatggacgacggg
gtgttcccccgcaccgcccggccgcacgtcgacgacctgatcgcccgcgccccccgcgtc
ggtgaccacgaccccaggaccgaagaccggcagctgctcctggacgcggtggcctccgcc
agcgaccacctgatcgtcacgtggaccggtcaggaggaacgcagcgacgaggccgtacca
ccctgcgtgccggtcgccgagctgatgcgggccgtcgaccagctcgccccgggcgccgac
cgtccgctctcggaccggttgactacccgccacccgcggtacgcccacgaccccgccgcc
ttcgaccccgatggacgccccggcttcgaccagctcgcccacagggccgccgccgcaacc
gtgtcggccgacgacgccgggcgggcgctgctgccgccacccgaggacgacgatgtcgac
ctggctgcgctgtcccgcttcgcgatcgatccggccacgacgttcgtccgtgaggcgttg
ggcatctgggtgcccgacgatcccgaggcgcccgacgagaacgtcccggtcgagctcgac
gggctggaggggtggaaggtcggtcaggcgctgctggccgtctccccctccgacaccgag
gccctcgacggcgtcgtggccgcggcgcgtggccgtgggctgttgcccccgccggagctg
cgcccggggaaggtcaacacgatcccggtgatggtggaggaacttcgtgcccactgcgcg
cagatcggggtgcccgccaacggttcgggcaaccacgtcgccgtcgacatcgcggtcgac
cggtggcgggtgcacggggccgtgtcgggcgtggtcggcgaccgcatcgtcgacgtgtcc
tactcacgcctcaccggcaagcggctgatgcgggcatggatcgacctgctcgccctcacc
gtgcaggaccccgaacggccgtgggagtccgtcgtcgtgggccgcgacaaggtccagcgc
aaggacgtcgcgtccagccgccgcatcgacccgctggccccgtccgccgaccgccggctc
gagctggccaccggcttcctgggcgacctgctgcagctgcgccacgacgggctgcgcgaa
ccgctgatcgtgccgtcggagaccgcccacgcctacgcgaaggcccgtgtggtcgaccac
gaggcctccgaggaggccgacaacaccgcctgcaaggcatgggacccccaccccatgggg
ttctccagcgactgcggtcggccggcccacgtcctgctgctcggtgacgtgcatacctac
gaccgcctgacccgcgagccgcccaggccggcagacgagcggctcggcatggccgcggag
ccccatcgcttcggggcgctcgcgatgcgcctgtgggcaccgctgctgcagcgcctggga
ggccaccgatga
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