Euzebya pacifica: DVS28_a3361
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Entry
DVS28_a3361 CDS
T05999
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
euz
Euzebya pacifica
Pathway
euz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
euz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVS28_a3361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
euz03019
]
DVS28_a3361
03016 Transfer RNA biogenesis [BR:
euz03016
]
DVS28_a3361
Enzymes [BR:
euz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DVS28_a3361
Messenger RNA biogenesis [BR:
euz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DVS28_a3361
Transfer RNA biogenesis [BR:
euz03016
]
Prokaryotic type
tRNA degradation factors
DVS28_a3361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
KH_1
S1
PNPase
RNase_PH_C
KH-I_KHDC4-BBP
KH_5
S1_RRP5
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AXV08036
UniProt:
A0A346Y0N9
LinkDB
All DBs
Position
complement(3851741..3854176)
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AA seq
811 aa
AA seq
DB search
MTKLGTYSASATVGGVEITMESGKLAGQAGGSVVCHLGETILLVTSTGSRAPKDHLDFFP
LTVDFEEKMYAAGRIPGSFFKREGRPSENAILTCRLVDRPMRPTFHDGLRNEIQILITTL
SADQSNPPDVLAINGASAATMLAGIPFDGPVAGVRMGMDRDGNWTVFPTFEWMDEEGVFD
LVVAGRLNPDSGEVDVLMVEAEATEDAVTKIEMGAVKPTEEVLGKALEEAKGYLKQLCAL
QVDFAGKAPKAEARDFPLFAAYDSRVYDAVEKATAKELGRILVDDRMDKKQRGDAIAELR
DQAIDYVFANAGDVDVADDELEKQAKNAYRSLEKTLIRRRVVNDGVRIDGRGPADLRALS
AEVGVLPRAHGSGIFTRGETQVLNILTLGMMRDAQRLDTIDPNTEKRYIHHYNFPPFSVG
ETGFMRGPKRREIGHGALAERALLPVVPSTEVLPYAMRLVSEVVSSNGSTSMASVCASTL
SLMDAGIPIHAPVAGIAMGLISEDGKYTTLTDIQGAEDAFGDMDFKVAGTADFVTALQLD
TKLSGIPAQVLADALNQAKDARMEILDVITDCISEPRKEMNKYAPKVHVEYIPQDKIGEV
IGPKGKIIREITEETGANIDVEDDAGRGVVRIYAADGPSADMALARIRAIANPVVPQEGE
RYYGTVVKTVDFGAFVNLTPGADGLLHISQLGGNKRLDHADEAVSVGDKLWVEVREVKNG
NKFSLAIIEEPTAGAADDDDDDVEVEAQPETRAAETRAEEKPAEPRAEGGDRGRSRERGG
DSDGGRERTRTRSRDGGSEDGEGRRRRRRRS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctcggtacctactccgcgtctgccactgtcggcggcgtcgagatcaccatg
gagtccggcaagcttgccggccaggccggcggctctgtcgtctgccacctcggcgagacg
atcctgctggtcacctcgaccggcagccgtgcgcccaaggaccacctcgacttcttcccc
ctgacggtggacttcgaggagaagatgtacgccgcgggtcgcatcccgggctccttcttc
aagcgcgagggacgccccagcgagaacgcgatcctgacctgccgcctcgtcgaccgcccc
atgcggccgacgttccacgacggcctgcgcaacgagatccagatcctcatcaccacgctg
tccgcggaccagtccaacccgccggacgtcctggccatcaacggcgcctcggctgccacg
atgctggccggcatccccttcgacggcccggtcgccggtgtccgcatgggtatggaccgc
gacggcaactggacggtcttccccaccttcgagtggatggacgaagagggcgtgttcgac
ctcgtcgtcgccggtcgcctgaaccccgactccggtgaggtcgacgtcctcatggtcgag
gccgaggccaccgaggacgcggtcaccaagatcgagatgggtgcggtcaagccgaccgag
gaagtcctcggcaaggcgctggaggaggccaagggctacctcaagcagctgtgtgccctg
caggtggacttcgccggcaaggccccgaaggccgaggctcgcgacttcccgctgttcgcc
gcctacgactcccgcgtctacgacgccgtggagaaggccaccgccaaggagctcggccgc
atcctggtcgacgaccggatggacaagaagcagcgcggcgacgccatcgcggagctgcgt
gaccaggcgatcgactacgtgttcgccaacgccggtgacgtcgacgtcgccgacgacgag
ctggagaagcaggccaagaacgcctaccgctccctcgagaagaccctcatccgtcgccgc
gtcgtcaacgacggcgtccgcatcgacggccgtggcccggctgacctccgcgccctgtcc
gccgaggtcggcgtcctgccccgcgcgcacggctcgggcatcttcacccgcggtgagacc
caggtcctgaacatcctgacgctcggcatgatgcgtgacgcccagcgcctggacaccatc
gacccgaacaccgagaagcggtacatccaccactacaacttcccgccgttctccgtcggc
gagaccggcttcatgcgcggtccgaagcgtcgtgagatcggtcacggtgcgctggccgag
cgggcactcctgcccgtcgtgccctccaccgaggtcctgccctacgccatgcgcctggtc
agcgaggtcgtgtcctccaacggctcgacctccatggcctcggtctgcgcctcgaccctg
tccctgatggacgccggtatcccgatccacgcccccgtggccggtatcgcgatgggcctc
atctccgaggacggcaagtacacgaccctcaccgacatccagggagccgaggacgccttc
ggcgacatggacttcaaggtcgccggtaccgcggacttcgtgaccgccctgcagctggac
accaagctgtcgggtatccccgcccaggtcctggccgacgcgctgaaccaggccaaggac
gcccggatggagatcctggacgtcatcacggactgcatctccgagccccgcaaggagatg
aacaagtacgcgccgaaggtgcacgtcgagtacatcccgcaggacaagatcggcgaggtc
atcggcccgaagggcaagatcatccgcgagatcaccgaggagaccggcgccaacatcgac
gtcgaggacgacgccggtcgcggtgtggtgcgcatctacgccgccgacggtccctcggcc
gacatggccctggcccgcatccgtgcgatcgccaaccccgtcgtcccgcaggagggcgag
cgctactacggcacggtcgtcaagaccgtcgacttcggcgccttcgtcaacctgaccccg
ggtgcagacggcctgctgcacatctcccagctgggcggcaacaagcgcctggaccacgcg
gacgaagccgtcagcgtcggtgacaagctgtgggtcgaggtccgcgaggtgaagaacggc
aacaagttctccctggccatcatcgaggagccgacggctggtgccgccgacgacgacgat
gacgacgtcgaggtcgaggcgcagccggagacccgcgctgcggagacccgcgcggaggag
aagccggccgagccccgcgccgagggtggcgaccgtggtcgcagccgcgagcgtggtggc
gacagcgacggtggccgggagcgcacgcgcacccgcagccgtgacggtgggtccgaggac
ggcgaaggccgtcgtcgtcgccgtcgtcgctcctag
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