Euzebya pacifica: DVS28_a3380
Help
Entry
DVS28_a3380 CDS
T05999
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
euz
Euzebya pacifica
Brite
KEGG Orthology (KO) [BR:
euz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
euz03016
]
DVS28_a3380
Enzymes [BR:
euz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DVS28_a3380
Transfer RNA biogenesis [BR:
euz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DVS28_a3380
Prokaryotic type
DVS28_a3380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
TruB-C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AXV08055
UniProt:
A0A346Y0Q8
LinkDB
All DBs
Position
complement(3872471..3873442)
Genome browser
AA seq
323 aa
AA seq
DB search
MTATPPDTSTSSTADRGPLAPDVEGVLVVDKPLGVTSHDVVAKVRRIVGSKPGRRGKRKG
PKVGHAGTLDPDASGVLVVCIGRATKLVPYLQASQKTYDARMRLGRTTDTLDNEGVETSR
TDASHITEEMVCEALHAFVGDIEQIPPMVSAVKVDGERLYEKARRGEEVERKPRPVTIHD
IVMADFDPGDQPSTSFLVTCTAGTYVRTLAADVGERLGVGAHLTGLRRLGSGRFSIEDAT
SLETLQVMAEEGTFGEAVMSMADAMADYPAVALDAEQAALVSNGRGIPATGHDGPVSILD
PAGQLIAVMRDQGRLARPEVVFN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccccaccggacacgagcacgtcctcgaccgccgaccgggggccgctggca
cccgacgtcgagggcgtcctcgtcgtcgacaagccgctgggcgtgaccagccacgacgtc
gtcgccaaggtgcgtcgcatcgtcggttccaagcccgggcggcggggcaagcggaaggga
cccaaggtcggccacgccggcaccctggaccccgacgcctcgggcgtgctggtggtctgc
atcggtcgggccaccaagctcgtgccgtacctgcaggcctcgcagaagacctacgacgcc
cgcatgcggctgggtcggaccaccgacaccctcgacaacgagggcgtggagaccagccgc
accgacgcctcccacatcaccgaggagatggtctgcgaggcgttgcacgccttcgtcggc
gacatcgagcagatcccccccatggtctcggcggtcaaggtcgatggcgagcggctgtac
gagaaggcccgtcggggtgaggaggtcgagcgcaagccccgacccgtcaccatccacgac
atcgtcatggccgacttcgacccgggcgaccagcccagcacgtcgttcctggtcacctgc
acggctggcacctacgtgcgcaccctggccgccgacgtcggtgaacggctgggcgtcggc
gcccacctgaccggcctccgccggctggggtcgggccggttctccatcgaggacgccacc
tcgctggagacgctgcaggtcatggcggaggagggcacgttcggcgaggccgtgatgtcc
atggccgacgcgatggcggactacccggcggttgcgctggacgccgagcaggccgcgctg
gtcagcaacgggcgcggcatccccgccacgggacacgacggccccgtgtccatcctcgac
cccgccggccagctgatcgccgtgatgcgcgatcagggtcggctcgcacgcccggaggtg
gtgttcaattga
DBGET
integrated database retrieval system
