Euzebya pacifica: DVS28_a3548
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Entry
DVS28_a3548 CDS
T05999
Name
(GenBank) Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
euz
Euzebya pacifica
Pathway
euz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
euz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DVS28_a3548
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
euz02000
]
DVS28_a3548
Transporters [BR:
euz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DVS28_a3548
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6894
Motif
Other DBs
NCBI-ProteinID:
AXV08221
UniProt:
A0A346Y174
LinkDB
All DBs
Position
complement(4052794..4054155)
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AA seq
453 aa
AA seq
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MTFYFHHPTGLSLMARLVSSAAGDDGANVSGFRNDEYDLLYEAQAATDDTAARREAVQAA
QALVYEQVPIRPIFYPVVGAAYRSDSWSGIEPAVGNPLFNVWNAVEAEPLTDRDTLIVGT
TFEPPTLNPTLLDTLEAQLPLSLIYDPLMRIGRDGELMPWAAEEVTTDGRVLTVRIREGM
TFHDGEPVTADDVAFSLQYVVDTQSPAYSSRLTAMESATALDEHTVEIVLHEPSAAFPAV
ALATVPVLPEHIWSSIDNPTDFVNEAAVGSGPFSLDARSIGSSVTFSANTDHFSSPVVSA
LQLVVLGSFDAGIGALGTGEIDLLDDVQNAVNFETLLDQEGVEVVQTESHGWRGLHFNMR
HAPFDDLHFRTALSLLVPTQDIIDVIVAGYGAPAGSFIPPVLSQWHNEALDAYETDPAAA
MAELDAAGYVRDEDGTLYYPPEGVDGRVLHNDG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgaccttctacttccaccaccccacgggactcagcctgatggcccggctggtctcttcg
gctgctggtgacgacggggccaacgtctcgggcttccgaaacgacgaatacgacctcctc
tacgaagcgcaggcagcgaccgacgacaccgcggcccgccgggaggcagtgcaggccgcc
caggcgctggtctacgaacaggtaccgatcagaccgatcttctatcccgtggtcggcgcc
gcgtaccggtccgactcctggagcggcatcgaacccgccgtcggcaaccccctgttcaac
gtgtggaacgccgttgaggccgagccgctgaccgaccgcgacaccctcatcgtcggcacg
accttcgagccgccaacgctcaaccccacgctgctggacaccctcgaggcacagctgccc
ctctccctcatctacgacccgctgatgcgaatcggacgtgacggcgagctgatgccctgg
gctgcagaagaggtcacgactgacggaagggtcctgacggtccggatccgcgagggaatg
accttccacgacggcgaacccgtcaccgccgatgacgtggccttctcgctgcagtacgtg
gtggacacccagtcacccgcctacagctcgcggttgaccgccatggagtcggccacggca
ctggacgaacacacggtcgagatcgtcctccacgaaccgtccgcggcattcccggccgtg
gcactggccaccgtgccggtcctgcccgaacacatctggtcgtccatcgacaacccgacg
gacttcgtcaacgaggcggcggtgggctccgggcccttcagtctcgacgcccgatccatc
gggtcctccgtcactttctcggccaacaccgaccacttcagctcgcccgtggtgagcgcc
ttgcagctggtcgtcctcggcagcttcgacgccggcatcggcgcactcggcacgggcgag
atcgacctgctggacgatgtccagaacgccgtgaacttcgagacgctgctggaccaggaa
ggcgtcgaggtcgtccagaccgagagccacgggtggcgcggactgcacttcaacatgcgt
cacgcccccttcgacgacctgcacttccgcacggccctgtcgttgctggttcctacccag
gacatcatcgacgtcatcgttgccgggtacggcgcacccgctggatccttcatcccgccc
gtgctgagtcagtggcacaacgaggcgttggacgcctacgaaaccgatccggcggctgcg
atggccgaactcgacgcggcgggctacgtgcgagacgaggacggcaccctctactacccg
ccggagggggtggatgggcgtgtcctccacaacgacggctga
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