Euzebya pacifica: DVS28_a3646
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Entry
DVS28_a3646 CDS
T05999
Name
(GenBank) Geranylgeranyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
euz
Euzebya pacifica
Pathway
euz00900
Terpenoid backbone biosynthesis
euz00997
Biosynthesis of various other secondary metabolites
euz01100
Metabolic pathways
euz01110
Biosynthesis of secondary metabolites
Module
euz_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
euz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
DVS28_a3646
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
DVS28_a3646
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
euz01006
]
DVS28_a3646
Enzymes [BR:
euz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
DVS28_a3646
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
DVS28_a3646
2.5.1.29 geranylgeranyl diphosphate synthase
DVS28_a3646
Prenyltransferases [BR:
euz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
DVS28_a3646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AXV08319
UniProt:
A0A346Y1H2
LinkDB
All DBs
Position
complement(4180887..4181990)
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AA seq
367 aa
AA seq
DB search
MHTMTSSDTTDLLDPPPGGVLGGVAGRVDAVLERFLRARADELADLDPALEPVADAVTAL
VSAGGKRLRPAFVWWGYRAATGHTDPEVLKPAGAVELLHTFALIHDDIMDRSATRRGLPA
VHTALRDHHIEAGLSGDPEWFGVGGGILAGDMVFVWADMLFEAARLEHRAMARARRVFGQ
LRAEVMAGQYLDLRLSGLPAASEADSLRVSLLKSGRYTVTRPLQMGAALGGTDPDLDRTL
STFGDAVGVAFQLRDDVLGLLGDPDTTGKGSLEDIREGKRTMLILHARDQATPAQREVLD
RVVGNPDATRDDADAVRQIVVDTGAADHVEAHLTGLRADADRAVEHLSDPSRSALLELAS
VAVDRSA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccatgacctcttccgacaccaccgatctgctcgaccctcctccgggaggtgtg
ctcggcggtgttgccggccgggtcgacgcggtcctcgaacggttcctgcgcgctcgcgcg
gacgaactggctgatctcgaccccgccctcgaacccgtcgcggatgcggtcaccgcgctg
gtgtcggctggtggcaagcggctgcgtcctgccttcgtgtggtggggctaccgggccgcg
acgggacacaccgaccccgaggtgctgaagcccgccggtgccgtcgagctgctgcacacc
ttcgcgctcatccacgacgacatcatggatcgctcggccacgcgtcgcgggttgccggca
gtccacaccgccctgcgcgaccaccacatcgaggccggcctctccggcgaccccgagtgg
ttcggcgtcggcggcgggatcctcgccggtgacatggtcttcgtctgggccgacatgctg
ttcgaggcggctcgtctggagcaccgtgcgatggccagggctcgacgcgtgttcgggcag
ctccgcgcggaggtgatggccggccagtacctggacctgcggctctccggccttcccgcg
gcatcagaggccgactcgctgcgcgtgtccctgctgaagtccggccggtacacggtcacc
cgcccgctgcagatgggggcggcgctcggcggaaccgatccggacctcgaccgcacgctg
tcgacgttcggtgacgccgtcggggtggccttccagctgcgtgacgacgtcctcgggctg
ctcggcgatcccgacaccaccggcaagggatcgctggaggacatccgcgagggcaagcgc
accatgctgatcctccacgcccgtgaccaggccacccctgcccagcgcgaggtcctcgat
cgggtcgtcggcaaccccgacgccacgcgggacgatgccgatgccgtccgccagatcgtc
gtggacaccggtgccgccgatcacgtcgaggcccacctgaccggtctccgggccgacgcc
gaccgcgcggtggagcacctttccgacccctccagatccgccctgctcgagctcgcatcc
gtggccgtcgaccggagcgcctga
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