Euzebya pacifica: DVS28_a3780
Help
Entry
DVS28_a3780 CDS
T05999
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
euz
Euzebya pacifica
Pathway
euz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
euz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVS28_a3780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
euz03021
]
DVS28_a3780
03019 Messenger RNA biogenesis [BR:
euz03019
]
DVS28_a3780
Transcription machinery [BR:
euz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DVS28_a3780
Messenger RNA biogenesis [BR:
euz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DVS28_a3780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Motif
Other DBs
NCBI-ProteinID:
AXV08452
UniProt:
A0A346Y1V5
LinkDB
All DBs
Position
complement(4336505..4338508)
Genome browser
AA seq
667 aa
AA seq
DB search
MDRSVLARKPMTELKDIASHLNMRGFQKLRKAELIDAIVESATGQAAASTNGAADTTEVD
DADADRTRSRTRTRARDTEGQSGEDAASDAAPAGEDAAARAAREETARKVLPPSARQSDA
GGDSGSEKGQADKKSAEKSQPEERTRSRERNTSRGANRSGDNGNNRARGGKSDGNRDGGR
DSGGGRDSGGRDGGGRDGGGRDSGGRDSGGRDSGRDSGGRDSGRDSNAGGKGEDRPRDGG
RKDDDRGRSDAPRSDNDSSNDDDDDDDDDAANRKRRSRRDRRKRNRERAQQENQQGGSGG
GGGNEPGEVRAGVLDILPEGYGFLRTTGYTPGDRDVYVSQGQIRKHGLRRGDVVQGPIRQ
QRNNEKVPALHHVQKVNGGELEGGQVPERPDFRDLVPVYPSEQLRLETEKAPTVLRAIDL
LAPIGRGQRALLVAPPAAGRTDTLKGIGQAIATNAPEAHLMVLLIDERPEDVTDVKRAIP
GEVIASTFDRPVEDHTQVAELAMERARRLVELGHDVVVLVDSLTRLTRAYGSGGIDATSL
YPAKRFFGSARKIEDGGSLTIVAAMLTGDGSAVDEAILEEFLGTANAVIHLDGDVAPHLR
PVVRPDTSATRREELLVDDETLQAIWAVRKRLADLPHDEAARTIASDLEGTLDNATYLAG
AGGSSTR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcagcgtcctggctcgcaagcccatgaccgagctgaaggacatcgcctcgcat
ctcaacatgcgcgggttccagaagcttcgcaaggccgagctgatcgacgcgatcgtcgaa
tcggccaccggccaggcagccgcgtccacgaacggcgcggccgacacgaccgaggtcgac
gacgccgacgccgatcggacgcgttcgcgcacccgaacccgcgctcgtgacaccgagggc
cagtccggcgaggacgcggcctccgacgccgcacctgctggcgaggacgccgctgcgcgg
gcggcgagggaggagacggcccgcaaggtgctgccccccagcgctcgccagtccgacgca
ggcggcgacagcggctccgagaaggggcaggcggacaagaagtccgcggagaagtcgcag
ccggaggagcgcacccgctcccgcgagcgcaacacgtcccgtggtgccaaccgcagcggc
gacaacggcaacaaccgcgcccggggtggcaagtcggacggcaaccgtgacggtggccgt
gattccggtggtggtcgtgacagtggcggtcgtgacggtggcggccgtgacggtggcggc
cgtgacagtggcggccgtgacagtggcggccgtgattccggtcgtgacagcgggggtcgt
gacagcggtcgcgacagcaacgccggcggcaagggcgaggaccggccacgcgacggtggc
cgcaaggacgacgaccgcggccgttccgacgccccccggtccgacaacgactcctccaac
gacgatgacgacgacgacgatgacgacgcggcgaaccgcaagcgtcgcagccgtcgggac
cgtcgcaagcgcaaccgcgagcgtgcccagcaggagaaccagcagggcggcagcggcggc
gggggcggcaacgagcccggagaggtcagggccggcgtgctcgacatcctccccgagggc
tacgggttcctccgcacgaccggctacacccccggcgaccgcgacgtctacgtctcccag
gggcagatccgcaagcacgggctgcgccgcggcgacgtcgtgcagggtcccatccgccag
cagcgcaacaacgagaaggtgcccgcgctgcaccacgtgcagaaggtcaacggcggcgag
ctcgagggcggacaggtgcccgagcggcccgacttccgcgacctcgtgccggtctacccc
agcgagcagctgcgcctcgagaccgagaaggccccgacggtcctgcgtgccatcgacctg
ctcgccccgatcggccggggccagcgtgccctcctcgtggcgccgccggcggccggccgg
accgacaccctcaagggcatcggccaggcgatcgccaccaacgcccccgaggcccacctg
atggtcctgctgatcgacgagcgtcccgaggacgtcaccgacgtgaagcgcgccatcccc
ggtgaggtcatcgccagcaccttcgaccggccggtcgaggaccacacccaggtcgcggag
ctcgccatggagcgtgcccgtcggctggtcgagctcggccacgacgtcgttgtgctcgtc
gactcgctgacgcgcctgacccgtgcctacggcagcgggggcatcgacgccacgtcgctg
tacccggccaagcggttcttcggcagcgcccgcaagatcgaggacggcggctcgctgacc
atcgtggcggccatgctgaccggcgacggcagcgcggtcgacgaggccatcctcgaggag
ttcctcgggacggccaacgcggtcatccatctcgacggcgacgtggccccgcacctgcga
cccgtcgtgcggcccgacacctccgccacccgccgcgaggagctcctcgtcgacgacgag
accctccaggcgatctgggcggtccgcaagcgcctggccgacctgccccacgacgaggct
gcgcgcacgatcgccagcgacctcgagggcaccctggacaacgctacctaccttgccggt
gccgggggttccagcacacggtga
DBGET
integrated database retrieval system
