Euzebya pacifica: DVS28_b0365
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Entry
DVS28_b0365 CDS
T05999
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
euz
Euzebya pacifica
Pathway
euz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
euz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DVS28_b0365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
euz03021
]
DVS28_b0365
Transcription machinery [BR:
euz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DVS28_b0365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Neuregulin
Motif
Other DBs
NCBI-ProteinID:
AXV10135
UniProt:
A0A346Y6N8
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All DBs
Position
pEDY32-46I:complement(319368..320246)
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AA seq
292 aa
AA seq
DB search
MSDRMSIEELTARSDETLQRLADLRARLEAQREYEANLPPRSEITDFQGPERRMVVRLAV
AVDQCKADLCSLHTALVVSIARKWAGGRQDLMEEYVQAGRLGLLEAIDSYQIGAGKFSSW
AYKNIVRVVAEARNNAADTPLSAWDRKIEPRIRRAQRAVLDANPLAAELGPEVMKACKDS
IADGVSERTITAILTATRMSGLDVSAPLGTPSHDEDVESAQLLEQIQEAAEGLDDECRIA
LVMRLGLDGGHEATWHEIADRIGLATGTARLRYEEAVDTIRKRMSRTPAGLF
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaccgcatgtccatcgaggagctgaccgcacgctcggatgagacgctccagcgt
ctcgctgaccttcgtgctcgcctcgaggcgcagagggagtacgaagccaatctgccgccg
cgttcggagatcactgacttccagggtccggaacgacgcatggtcgttcgtcttgctgtg
gcggtggaccagtgcaaggccgacctgtgcagccttcacactgcgctggtcgtcagcatt
gcccggaagtgggccggcggacggcaggacctgatggaggagtacgttcaagcaggacgt
ctcgggctgctcgaggcgatcgacagctaccagatcggggccgggaagttctcctcctgg
gcgtacaagaacatcgtccgtgtcgttgcagaggcacgcaacaacgcggccgacaccccc
ctgtcggcttgggaccggaagatcgaacctcggatccggcgtgcgcagcgagccgtcctg
gatgccaaccctctcgccgccgaactcgggcccgaagtcatgaaggcgtgcaaggactcc
attgccgacggggtgtcggaacgaacgatcaccgcgatcctgaccgcgacccggatgtct
ggcttggacgtgtccgcgccccttggcacccccagtcacgacgaggacgtggaatcagcc
caacttctcgaacagattcaggaggccgccgaaggcctcgatgacgaatgcaggatcgcg
ttggtgatgcggctcgggttggacgggggacatgaggcgacctggcacgagatcgccgac
cggataggcctcgcgacgggcacggcccgcctcagatacgaagaggcagtcgacaccatc
cggaaacggatgagcagaaccccagccggcctgttctga
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