Epilithonimonas vandammei: EIB75_02250
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Entry
EIB75_02250 CDS
T06885
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eva
Epilithonimonas vandammei
Brite
KEGG Orthology (KO) [BR:
eva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eva03032
]
EIB75_02250 (topA)
03400 DNA repair and recombination proteins [BR:
eva03400
]
EIB75_02250 (topA)
Enzymes [BR:
eva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EIB75_02250 (topA)
DNA replication proteins [BR:
eva03032
]
Prokaryotic type
DNA Topoisomerases
EIB75_02250 (topA)
DNA repair and recombination proteins [BR:
eva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EIB75_02250 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AZI54149
UniProt:
A0A3G8Z9R7
LinkDB
All DBs
Position
437666..440224
Genome browser
AA seq
852 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDYEVKSSFGHIRDLPKKGMGIDLSNFTPDYEVSADKK
KLVTELKAAVKKSEMVWLASDEDREGEAIAWHLAEELKLKPENRKRIVFHEITKNAILKA
IENPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKTGLSAGRVQSVAVRLIVEREKE
IREFVPKPSFKVEGVFLNDGKQEIAAKLKKDFEKESDAETFLQQAQTTEFKVLNVETRPG
TRTASAPFTTSTLQQEASSRLGYNVTTTMRLAQRLYEEGFITYMRTDSVNLSQEAINGAK
AQILSEYGENYSKPRNYTTKSSSAQEAHEAIRPTDFSVKTVGDAQLNKLYQLIYRRTLAS
QMENAKIEKTVIEIGNPKLSQHFEAQGEVIIFDGFLKAYGIVKTEDDDDDSNEKLLPKVK
VGEILDYKTITATEKFTKPAARFTEAGLVKKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPQTREIVKMTLGKSGVKKEVLEEKFGGDKNKFVPTDIGEVVNDFLTDNFAEILDYGFT
ARVEEGFDEIANGDQKWKEMMTDFYSKFHPRIEDVEENADRATGERILGVDPKSGKNVHA
RIGRFGPMIQIGEQDDEEKPTFASLMANQNIATITLEEALELFKLPFDLQEVDGQPVSVG
VGRFGPYVKWGETYISIPKGEDPLSVNQERAEEIINEKKRADAPIATYKGEPVTKGTGRF
GPFIKYKSIFVNVPKRYDFDNLSQSDINELIDAKLDKEANRYIQQWEKEKIAIENGRWGP
FIKFGKANFKIPKKADDTKYEAEELKEISLDEVKKWITEQDPKAFAEKKKPAAKKATTAK
KPAAKKAPAKKK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaatttagtcatcgtcgagtctccggcaaaagcaaaaacgattcagaagtat
ttaggtaaggattatgaggtcaaatccagctttggacatatccgtgatctgcctaaaaaa
gggatgggaatcgacttgtcgaatttcacacccgactatgaagtgtctgccgataaaaag
aaactcgtgaccgagctgaaggccgcagtaaaaaaatcagaaatggtttggttggcgtcc
gatgaagaccgcgaaggtgaagcgattgcgtggcatcttgctgaagaattaaaattgaag
ccggaaaaccgaaaaagaattgttttccacgagattacaaaaaatgccattttaaaagcg
attgaaaatccgagagatattgatcagaatttggtaaatgctcagcaggcgaggagagtt
ctagacaggatcgttggtttcgagatgtcgcccgtgctctggaaaaaagtgaagacagga
ttgtctgcgggaagagtgcagtcggtggcagtaagattgatagtagagagagaaaaagaa
atccgtgaatttgtaccgaaaccaagcttcaaagtagaaggggtttttctgaatgatgga
aagcaggaaattgcggccaaactgaaaaaagattttgagaaggaatcagatgcagagact
tttctgcagcaagctcaaaccacagaattcaaagttctgaatgtagaaaccagaccggga
accagaaccgcttcggctccatttacaacatctacattgcaacaggaagcatcttccaga
ctaggatataatgttaccactactatgcgactggcgcagcgactttacgaggaaggattc
attacctatatgagaacggattccgtgaatctttctcaggaagccatcaatggtgcgaaa
gctcagattctttcagaatacggcgaaaattattctaaaccaagaaattatacaacaaaa
tcatcttccgcacaagaagcgcacgaggccattcgcccgacagatttttcggtgaaaacc
gtaggcgatgcgcagctaaacaaactgtatcaattgatctacagaagaacgcttgcttcc
cagatggagaatgccaaaatcgagaaaacggtgatagaaatcgggaatccgaaattgtct
cagcattttgaagcgcagggagaagtgattatattcgatggtttcctcaaggcttatggc
atcgtaaaaacagaagatgatgacgatgatagcaacgaaaagctattaccaaaagtaaaa
gtaggagaaatcctagattataaaaccatcacggcaacagaaaaattcacaaaaccagct
gcaagatttaccgaagcaggattggtgaagaagttggaagaactgggaataggacgtcca
tctacgtatgcacccacaatccagacgatccagaaccgtgagtatgtagataagagagaa
atagaaccgcagacaagagagatcgttaagatgacattgggcaaatctggtgtgaagaaa
gaagttctcgaagagaagtttggcggagataagaataaatttgttccaacggacattggt
gaagtagtgaatgacttcttaaccgataattttgctgagatcctggactacggcttcact
gcgagagtggaagaaggctttgacgagattgccaatggcgaccagaagtggaaggaaatg
atgacggatttctactccaagttccacccgagaattgaagatgtggaagaaaatgctgac
agggcaaccggcgaaagaatcctgggtgtagatccgaaaagcggtaagaatgttcacgct
agaattggtaggtttgggccgatgatccagattggggagcaggatgatgaggagaaaccg
acattcgcatcgctgatggccaatcaaaatatagcaaccatcactttggaagaagctttg
gagctgttcaagcttccatttgatcttcaggaagtagacggtcagccagtttctgtgggc
gtgggaagatttggtccttatgtgaaatggggagaaacgtatatcagcattcctaaaggc
gaagatccgctgtccgtgaatcaggaaagggcggaagaaatcattaatgagaagaaaaga
gccgatgcgcctattgccacttataaaggtgagcctgtaaccaaaggaacaggaagattc
gggccgtttatcaagtacaaaagtatctttgtgaatgtgccaaagcgatatgacttcgat
aacctttcccagagcgacatcaatgaactgattgatgccaagctggataaagaggctaac
cgttacattcagcagtgggaaaaagaaaaaatcgccatagagaatggtcgttggggtcca
tttatcaagtttggaaaagcgaattttaagatcccgaaaaaggcagacgatactaaatat
gaagccgaagagctgaaagagatctctctggatgaagtgaagaagtggatcaccgagcag
gatccgaaagcttttgccgagaaaaagaaaccagccgctaagaaagcaactaccgcgaaa
aagcctgctgcgaaaaaagcgccggcgaaaaagaagtaa
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