Epilithonimonas vandammei: EIB75_03400
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Entry
EIB75_03400 CDS
T06885
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
eva
Epilithonimonas vandammei
Brite
KEGG Orthology (KO) [BR:
eva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eva03009
]
EIB75_03400 (rlmD)
Enzymes [BR:
eva01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EIB75_03400 (rlmD)
Ribosome biogenesis [BR:
eva03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EIB75_03400 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Cons_hypoth95
Methyltransf_11
MTS
Methyltransf_15
N6_N4_Mtase
TRM5-TYW2_MTfase
RrnaAD
PCMT
Methyltransf_2
Methyltransf_4
PrmA
NpmA
UPF0020
2-ph_phosp
Motif
Other DBs
NCBI-ProteinID:
AZI54352
UniProt:
A0A3G8ZA49
LinkDB
All DBs
Position
679298..680707
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AA seq
469 aa
AA seq
DB search
MKNKKKNKILENIRLLSAGAKGVSVGKTEEGKTVIVSGAVPGDLVNVRVKKSKSNYFEGE
AIEILEYSEHRVEPKCIHFGTCGGCKWQNIAYEKQLDFKHSEVVNNIKRIGGVSDFETIP
ILGSKEQYFYRNKMEFSFSNSRWLTQYEISSEENFGNRDALGFHIPGMWSKILDLKECYL
QEDPSNPIRLAVKKYAVENGLEFYDVKAQEGFLRTLMLRQNSKGDWMVLFQLYKEMESER
IRLFDYLLSQFPQIKTLVFAINPKGNDSIYDLDIQTYFGEGYLFEEMDGLQFKIGPKSFF
QTNYKQALELYRKTLEFADLSGDQVVYDLYTGTGTIAQYVARNAKQVIGIEAVQEAIDAA
KEHAEINGLENCTFYCGDMKDIFNDEFLANHPKADVLITDPPRDGMHPKVVEQILKLSPE
KIVYVSCNSATQARDIALLKDSYELVKILPVDMFPQTHHVENIALLLKK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataagaaaaaaaataaaattcttgaaaatatcagactcctttccgccggtgcg
aaaggagtttctgttggtaaaacagaggaaggaaaaactgtgattgtttcaggtgctgtc
cctggtgacctagtaaatgtcagagttaaaaagtcaaaaagtaactattttgaaggagag
gctatagaaattttagaatattccgaacatagagtcgaacctaagtgcatccatttcgga
acttgtggtggctgtaaatggcagaatattgcttatgagaaacagctcgatttcaaacat
agtgaagtggttaataatatcaaaagaatcggaggtgtttctgatttcgaaactattcct
attttaggttctaaggagcaatatttttacaggaataagatggaattttctttttccaac
tcgcggtggcttacccagtacgagattagttctgaggaaaactttggaaacagagatgct
ttgggatttcatattccggggatgtggagcaagattctagatctaaaagaatgttatctg
caagaagatccatctaacccaattcgcttggcagtaaaaaaatatgccgtagaaaacgga
cttgaattctatgatgtaaaagctcaggaaggttttctaagaactttgatgttgcgtcag
aattctaaaggtgactggatggttcttttccaactctataaggaaatggaatcagaacga
attcgattatttgattatttattatcccaattccctcagataaaaactttggtttttgcc
atcaacccaaaaggtaatgacagtatctatgatttggatattcaaacatattttggtgaa
ggatatctgtttgaggagatggacggacttcaattcaaaataggaccgaaatcttttttc
cagaccaattataaacaggctttggaattatacagaaaaaccctcgagtttgcagattta
tcgggcgaccaggttgtttatgacctttacacaggaacaggaactatcgcacagtatgtc
gctagaaatgcgaaacaagttatagggatagaagccgttcaggaagctattgatgcagcc
aaagaacacgcagaaatcaatggattggaaaactgtactttttattgtggtgatatgaaa
gacatctttaatgatgaatttttagccaatcatccaaaagctgatgtgctgattactgat
ccaccaagagatggaatgcacccaaaggttgtagagcagattctaaaactgtcaccagag
aaaattgtgtacgtaagttgtaattctgcaacacaggcaagagatattgccttgctgaaa
gacagttacgaactggtaaaaatccttccagtagatatgtttccacagacgcatcacgta
gaaaacattgctttgcttcttaaaaaataa
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