Epilithonimonas vandammei: EIB75_03435
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Entry
EIB75_03435 CDS
T06885
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eva
Epilithonimonas vandammei
Pathway
eva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIB75_03435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eva03019
]
EIB75_03435
03400 DNA repair and recombination proteins [BR:
eva03400
]
EIB75_03435
Enzymes [BR:
eva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EIB75_03435
Messenger RNA biogenesis [BR:
eva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EIB75_03435
DNA repair and recombination proteins [BR:
eva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EIB75_03435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
zf-CXXC
NADH_4Fe-4S
DDT
Motif
Other DBs
NCBI-ProteinID:
AZI54359
UniProt:
A0A3G8ZAB7
LinkDB
All DBs
Position
687172..689073
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AA seq
633 aa
AA seq
DB search
MLSPINSNEKLIIDTLKNFWGYNDFRSSQKEIILSIISGKDTLALLPTGGGKSLCYQLPA
LVLEGVCLVISPLLALMKDQILMLQSLGIEGELLSSELDEFEEELVYNKCKDGLIQILYV
SPERLQNPLFLKNIQDIQISFIAVDEAHCISEWGSDFRPSYQNIKQFRQEFKKVPCLALT
ATATNKVVNEISNKLGLHETKIFRQSFRRDNLNVIVENISDKYNRILQFLNQNPASGIIY
SRTRKEAETLTDFLKNNNFPNVDFYHAGLPATEKERLQKKWISGRFHVLVSTNAFGMGID
KDNVKFVIHLSPSSTIENYYQEIGRAGRNGDEAIALLLWNNQELAHIDDIFRNQIPSKTE
YQKILTYLYSMFQIGDNDLPEKTFSLEIQKLNNLTKLSKAKIRNILSFLHNQELIYHKSS
ASASTIQSFVKPEELEQLSPSDAYFLELLFRNLPGLAIQKVYFSDAAFCSKNNFDIQTFK
VKLKQMQKAGYLEYLDGGQQAIKFLKPRNDRHLFGEYWRLFHHIQQNKLRKWEENKFYVR
DTDFCKMKLILSYFGEADSENCGKCSVCRKRTASKRNLSSEIILQLEKKPMTLDEMCAAL
HFYQRETVSETIIFLLDIGKVKMLNYKTYMLNQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgctttctccaataaattccaatgagaaattaatcattgatactctaaaaaatttttgg
ggttataatgattttagatcttctcaaaaggaaatcattttatccattatctccggaaaa
gatactcttgcacttttgccgacgggcggagggaaatctctttgttatcagctgccggca
ttggttttagaaggtgtttgcttagtcatatctccacttttagctttgatgaaagatcag
attcttatgcttcagtcattaggaatcgaaggagagttactcagttccgagttggacgaa
tttgaagaagaattagtctataataaatgcaaagacggattaatacaaattctttatgtc
tctcctgaaagactacaaaatcctttatttttaaaaaatattcaggacattcagatttct
tttatagcagtagatgaagcgcactgtatttccgaatggggatcagattttcgtcctagt
tatcaaaatataaaacaatttaggcaggaattcaaaaaagtgccttgtcttgcactcact
gcaacagctaccaataaagttgttaatgaaatatcaaacaaactcggtcttcatgaaaca
aagattttcagacaaagcttcagaagagataacctgaatgtcattgtagaaaatatttcg
gataaatataacagaatacttcagtttttgaaccaaaatccagcttcgggaattatctat
tccagaactagaaaagaagcagaaactttaactgattttttaaaaaataataactttcca
aacgtagatttctatcacgcaggattgccagctacagaaaaggaaagattacaaaaaaaa
tggatttccggtcgctttcacgtattggtgtctaccaatgcgttcggaatgggaatagac
aaggataatgtgaaattcgttatccatctgtcgccatcatctacaattgaaaactattat
caggaaataggaagagctggaagaaacggagacgaagctatagctcttttgctttggaat
aatcaggaacttgcccatatagacgatatttttcggaatcagattcccagcaaaacagag
tatcagaaaattctcacctacctttattctatgtttcagattggagataatgatttgccg
gaaaaaacattttctctagagattcaaaaactgaataatctgacgaaattatccaaagcc
aaaatcaggaatattctttcgtttctacataatcaggaattgatttatcataaaagctct
gcttctgcatccactattcagagttttgtaaagccagaagaattagagcagctcagtcct
tccgatgcctatttcttggaattgcttttcaggaatttaccaggattggcaatccaaaaa
gtttattttagtgatgccgcattttgcagtaaaaataattttgacatccagacttttaag
gtaaaattaaaacaaatgcaaaaagcaggttatctggaatatttggatggcggtcagcag
gccataaagttcctcaagccaagaaatgacaggcatctttttggagaatattggcggctg
tttcatcatatccaacagaataaactaagaaagtgggaagaaaataaattctatgtccga
gatacagatttttgtaaaatgaaactgattctcagttattttggtgaagctgattcggaa
aactgcggaaaatgttccgtttgcagaaaacggacagcgtccaagcgtaatctctcatca
gaaatcattttgcagttggagaaaaagcctatgacattggatgaaatgtgtgctgctctg
catttttatcagagagaaaccgtttctgaaaccattatttttctcttagatatcggaaaa
gtcaaaatgttgaattataaaacttatatgctcaatcaataa
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