Epilithonimonas vandammei: EIB75_04910
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Entry
EIB75_04910 CDS
T06885
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eva
Epilithonimonas vandammei
Pathway
eva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIB75_04910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eva03019
]
EIB75_04910
03009 Ribosome biogenesis [BR:
eva03009
]
EIB75_04910
Enzymes [BR:
eva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EIB75_04910
Messenger RNA biogenesis [BR:
eva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EIB75_04910
Ribosome biogenesis [BR:
eva03009
]
Prokaryotic type
rRNA helicases
EIB75_04910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
DUF7799
Motif
Other DBs
NCBI-ProteinID:
AZI54629
UniProt:
A0A3G8ZB14
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All DBs
Position
1037493..1039187
Genome browser
AA seq
564 aa
AA seq
DB search
MNLFTESNLSAEVLQAIGDLGFVEPTEIQKQTIPFISTDTRDLIALAATGTGKTAAFSLP
ILDMIDDNSRKIQLLVLCPTRELCLQITKDIKNYTKYLKDIKTTAVYGGSSIMDQIRSLR
DKPQIIVGTPGRVIDMIGRKALDFSEVRWVVLDEADEMLSMGFKDDLETILSETPETKQT
FLFSATMNKEVERISKNYLTNPHRISVGSINAVKKNIKHEYYVVGYRQKKEALKRLIDAN
PNQYSIIFCRTRMETQEIADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVDSLTHVIHFSLPDDPEVFVHRSGRTGRAGKDGISMALIKPEESRKLKQIKSD
TKIEMVEKNIPTGDDIIKAQVGGVFEKLLTEHEDLFQFDNSLIPDLSNFTKEELVHQLLQ
FQLKDLATYYRDRNDIQQQELNSRGDDRGSRRERGRERERNGEPRERRERNDRNDRGGKP
RRKNEDMVRFFFNLGKRDQLKKVDMLDIINKATSKSKKRADIGNIEILDKFSFFEIEKSY
KNEVLDGLTTMKFRGKEMRAEVAN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttacggaatccaatcttagcgctgaagttcttcaggcgattggcgacctc
ggcttcgtagagccgacagaaatccaaaaacagactattccttttatctctacagatact
cgcgatcttatcgcacttgcggcaacaggaacaggcaaaacagcagcattttcgcttccg
attttggatatgatagacgacaatagtcgtaaaatccaattattggtgctttgccctact
cgtgaactttgccttcagattaccaaagacatcaaaaattatacaaaatacctaaaagac
atcaaaactactgcagtttatggtggtagtagcattatggatcaaatccgatctttgaga
gacaaacctcagattattgtgggaactccgggtcgtgtgatcgatatgatcggaagaaaa
gcacttgatttttctgaagtacgatgggtggttttggatgaggcagacgaaatgttatca
atgggtttcaaagatgatttggaaactattcttagcgaaacgcccgaaactaagcaaact
ttcttgttctctgcaacgatgaacaaagaagtagagcgtatttctaaaaactatttgacc
aatcctcacagaatttctgttggatctatcaatgcagttaagaagaatatcaagcacgaa
tattatgtggttggttacagacagaaaaaagaagctttgaagagattgatcgatgcaaat
ccgaatcaatattcaatcattttctgtagaacaagaatggaaacgcaggaaattgcagat
ttcttgatgcaaaatggttacgcagcagatgcacttcatggtgatctttctcaagcacag
agagatacagtaatgaaaaaattcagactgaaaaacatcgatattttggtggcaacagat
gttgcagctagaggtttggatgtggattctttgactcacgttatccatttctctttacca
gatgatccagaagttttcgtacacagaagcggaagaacaggacgtgcaggtaaagacgga
atttctatggcgcttatcaaaccagaagaaagccgaaaattgaagcaaatcaaatctgac
acgaagattgaaatggtggaaaaaaatatccctactggcgatgatatcatcaaagctcag
gtgggtggtgttttcgaaaaattattgacagagcacgaagatttattccaatttgataat
agtttgattccagacctttctaactttaccaaagaagaattggttcatcaattattgcaa
ttccaattgaaagatcttgcgacttattatagggatagaaacgatatccaacagcaagag
cttaatagtagaggagatgacagaggaagcagaagagagagaggaagagagcgtgaaaga
aacggagagccaagagaaagaagagaacgtaacgatagaaatgacagaggtggaaaacca
agaagaaaaaatgaagatatggtaagattcttcttcaatcttggaaaaagagaccaactg
aaaaaagtggatatgttggacatcatcaataaagcgacttctaagtccaaaaaaagagct
gatatcggtaacatcgaaattttagataagttcagtttcttcgaaatagagaagtcatac
aagaacgaagttttagatggattgactactatgaaatttcggggaaaagaaatgcgcgct
gaagttgcaaattaa
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