Epilithonimonas vandammei: EIB75_10540
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Entry
EIB75_10540 CDS
T06885
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eva
Epilithonimonas vandammei
Brite
KEGG Orthology (KO) [BR:
eva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eva03032
]
EIB75_10540
03400 DNA repair and recombination proteins [BR:
eva03400
]
EIB75_10540
Enzymes [BR:
eva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EIB75_10540
DNA replication proteins [BR:
eva03032
]
Prokaryotic type
DNA Topoisomerases
EIB75_10540
DNA repair and recombination proteins [BR:
eva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EIB75_10540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
YebG
Motif
Other DBs
NCBI-ProteinID:
AZI55661
UniProt:
A0A3G8ZPA6
LinkDB
All DBs
Position
2223752..2224738
Genome browser
AA seq
328 aa
AA seq
DB search
MKLLRQSSGKNFFYTTKDQLTIKDKDKIDYIKSLVIPPAWTDVEITTNKRAKILAVGRDQ
KGRKQYIYNPKFRAKKDADKFDRILHFAESLEHMRRVTGQHLRKKKMTREKVLAAMVRLL
DSAYFRPGSPKYTQQNQSYGLTTIRKKHLNIEGDEMVFSYKGKSGKFQEKHIINSKLSKV
ISELEELPGYRLFKYYDENCELITVESQDLNQYIKEIMGEEFSAKDFRTWAGTMIAAGIL
DELGICEKQQQKEMKKRIRNAIVAVSEKLGNTPSVARDSYIDPRIFEHYKNGQTINYFQK
EIKKLLRKNENLSETEVGVLYMLKSKLK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttttgagacaatcttcaggtaaaaattttttctatacgacaaaagatcaatta
actataaaagataaggataaaattgattatatcaaatctctcgtcataccacctgcctgg
acagacgtggagattaccaccaataagagagccaaaatactagcggtaggcagagaccaa
aaaggcagaaagcaatatatttataacccgaaattccgggcaaagaaagatgcagacaag
tttgacagaattctgcacttcgcagaaagcctggaacatatgcgacgcgttacagggcag
catctccgaaagaaaaaaatgacacgtgaaaaagttctagcggcaatggttagactttta
gattccgcttactttagaccaggaagccccaaatatacgcaacaaaatcagagctatgga
ttaacgacaatccgcaaaaaacaccttaacatcgaaggtgatgaaatggtattctcttac
aaaggaaaatcgggaaaatttcaagaaaagcatatcatcaattccaaattatcaaaagtt
atttctgaactagaagaattgccaggctacagactctttaaatattacgatgaaaactgt
gaactgataactgttgaaagccaagatctgaatcaatatatcaaagaaataatgggcgaa
gaattttccgcaaaagacttccgaacctgggctggaacaatgattgccgcaggaattctg
gacgaactcggtatttgtgaaaaacaacaacagaaggaaatgaaaaaacggattcggaat
gcgattgtagctgtatcggaaaaactcggtaatacaccttctgtggcaagagattcctat
atagatccgagaatttttgagcattataaaaacggacagaccatcaactatttccagaaa
gaaattaaaaaactcctaagaaaaaatgaaaatctgtctgaaactgaagtaggtgtttta
tatatgctgaaatctaaacttaaataa
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