Epilithonimonas vandammei: EIB75_12825
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Entry
EIB75_12825 CDS
T06885
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eva
Epilithonimonas vandammei
Pathway
eva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIB75_12825 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eva03019
]
EIB75_12825 (recQ)
03400 DNA repair and recombination proteins [BR:
eva03400
]
EIB75_12825 (recQ)
Enzymes [BR:
eva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EIB75_12825 (recQ)
Messenger RNA biogenesis [BR:
eva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EIB75_12825 (recQ)
DNA repair and recombination proteins [BR:
eva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EIB75_12825 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
HTH_40
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Colicin_Pyocin
Dehydratase_hem
Motif
Other DBs
NCBI-ProteinID:
AZI56086
UniProt:
A0A3G8ZPZ7
LinkDB
All DBs
Position
complement(2689835..2692009)
Genome browser
AA seq
724 aa
AA seq
DB search
MKSPLQILQQYFGYENFRLKQANAVENVISKKDTFVLMPTGGGKSLCYQVPALVLEGTAI
VISPLIALMKDQVDALRVNGISASYINSSMSSFEQNETLNQLKKGELKLLYVAPEKLSAD
NGAFLKLLNDVNISLFAVDEAHCVSHWGHDFRPDYLFLNSLKSQFPNVPIIALTASADEI
TRKDIIKQLNLKEPLVLVSSFDRANIKYFVQTKKSVLQNIIQYINEHPDDSGIIYCLSRK
GTEEMANNLKENGINSAYYHAGLSSMERAKVQDDFIKDKIRVMVATIAFGMGIDKSNVRF
VMHADLPKNIESYYQETGRAGRDGLPSEAILFYSNADVIKLKRFALIEGNEEQSDLMLKK
LQQMTDFAEMQKCRRQYLMEYFGEKHDGNCNSCDYCLSNFETWDATLDAQKLLSAVFRLK
ERYGKNLIIDFLRGSKSVKITDDMRSLPTYGIGINNDKNYWQNLIKQLFINNYLAESKDE
FPVLKLTEESKLILFKNKKVELQKVKELAKAVTVNEIETQYPETELSHNSELFDKLRNIR
REQAEKENVPPYVIFSDATLMELATYLPQTKEELNEISGFGTFKIEKYGELFLSVIVEFC
EQNNLSSLIFNKKPKKKREPKTVNKSPAETFTTSYQMFKAGNSIEEIANIRNLAINTIQN
HLVNFVTVGTIKPSELMDTNKIEPILEIAKSQSIISLKAIKEELGEDYSYFEIHIAIAYY
KSQH
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctcctcttcaaatcttacagcaatattttggctacgaaaacttccgcctcaag
caagcgaacgccgttgaaaatgtaatttcaaaaaaagacacctttgttttgatgccaact
ggaggtggaaaatcgctttgctatcaggttccagcattggttttggaaggaacagccatt
gtcatttctccattgattgccttgatgaaagaccaagttgatgctttgcgtgtcaacgga
atttctgcttcgtacatcaattcttcgatgtctagttttgaacaaaatgaaactttaaat
caattaaaaaaaggagaactcaaacttttatatgttgcgccggaaaaactaagtgccgat
aatggcgcgtttttaaaattactgaatgatgtcaatatttccctgtttgcggtagatgaa
gcgcattgtgtttcgcattgggggcacgacttccgtccggattatttgtttttgaacagt
ttaaaaagtcaatttcccaatgtccctattattgctttgacggcaagtgcagacgaaatt
acaaggaaagatatcatcaaacaactgaaccttaaagaaccgcttgtcttagtttcatct
ttcgacagagcgaatattaaatattttgttcagacgaaaaaatctgtccttcagaatata
attcaatacattaatgaacatcccgatgattctggaattatctattgtttatcgagaaaa
ggaacggaagaaatggcgaataatttgaaagaaaatggtatcaattccgcctattatcac
gccggactttcttctatggaaagagcaaaagttcaggacgatttcattaaagataaaata
agagtaatggttgctactatcgcttttggaatgggaatcgacaagagtaatgtccgtttt
gtgatgcacgcagatttaccaaaaaatatcgaaagttattaccaggaaacaggaagagcc
ggaagagatggtttgccaagtgaagcgattttattttactccaatgcagatgtgataaag
ttgaagagatttgctttgatagaaggcaatgaagaacaatctgaccttatgctgaaaaaa
ttgcagcagatgaccgattttgcagagatgcaaaaatgcagaaggcaatatctgatggaa
tattttggcgaaaagcacgatggcaattgcaattcctgcgattattgtcttagtaatttc
gaaacttgggatgccactttggatgctcaaaaattactgagcgcagttttccggctgaaa
gaacgatatggaaaaaatttaattatcgattttctacgaggttcaaaaagtgtgaaaatc
acagatgatatgcgaagtttgccaacctacggaattggaatcaacaatgataaaaattat
tggcaaaacttgataaagcaattatttatcaataattatttagcggaatcaaaagacgaa
tttcctgttttaaaattgaccgaagagagtaaacttattttatttaaaaacaaaaaagta
gaacttcaaaaggtaaaagaattggcaaaagccgtcacagtcaatgaaatagaaacccaa
tatccagaaactgaactgagtcataattcagaattatttgataaacttagaaatataaga
cgggaacaagccgaaaaggaaaatgtgccaccttacgttattttttctgatgcaacctta
atggaactcgccacttatcttcctcaaacaaaagaagaactgaatgaaataagtggtttt
ggaacttttaaaattgaaaaatatggagaactatttctttcggtgattgtcgaattttgt
gaacagaataatttgagcagtttaatatttaataaaaaaccgaagaaaaaacgagagcca
aaaacagtcaataaaagtccagcagaaacatttaccacaagttatcaaatgtttaaagct
ggcaatagcatcgaggaaattgccaatattagaaatctggcgattaataccatccaaaat
catttagtcaactttgttactgttggaacaattaaacccagcgaattgatggatacaaat
aaaatcgaacctattttagaaattgcaaaaagtcaatccatcatatctttgaaagccata
aaggaagaattgggagaagattattcttattttgaaattcatattgccattgcttattac
aaatctcaacattaa
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