Echinicola vietnamensis: Echvi_0469
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Entry
Echvi_0469 CDS
T02388
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
evi
Echinicola vietnamensis
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
evi02000
]
Echvi_0469
Transporters [BR:
evi02000
]
Other transporters
Pores ion channels [TC:
1
]
Echvi_0469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
TTR_TEN1-4
Big_1
Motif
Other DBs
NCBI-ProteinID:
AGA76754
UniProt:
L0FS38
LinkDB
All DBs
Position
complement(514799..517885)
Genome browser
AA seq
1028 aa
AA seq
DB search
MHSNLRFSKAMYATAGMVFLAGIGTAFHPLTAKGIGNDVVMERNTPLMDVIAQAKKITGK
VTDDQGEPLPGATVRVKGTTNGTVTDIDGNFSIEVEEGAVLQVSFVGFVAQEVPIGNQAS
LSIQLVSDATQLDEMVVVGYGTQKRSDITGAIGSVKEGDFNKGVISNPVDLLQGKMAGVN
ITSTSGEPGAAQNVIIRGVGSLRSGTQPLYVLDGFLLDNADTGIASNPLNFLNPGDIESI
EVLKDASATALYGSRASNGVVVITTKKGKSGATQMNLSASTAWSSMANKIDVFSADEFRE
QVVAVGGDLEDFGGNTDWQDELTQVGLSKNINFSMSGSNTSNFSYFASLGYQDQEGILKN
SELERFSGKLNMNQKAFDGRLNVDYNLTASHTKNLRPSIGSTISDMLSLNPTVPTYTDGE
PTLLNTNALNPLKRYELYSDDAANNRILATISPSFEIVDGLTYKLNLGVDYSSTNRYQQY
RPYSGVINESNISDGTLDEGISENTNKLVENTLTYNWHNYQHNLTVLAGHSYQTFLDEYR
LTSARGFADNNIEPRYQDHNSTSEYPTTVSSSAVKNELQSFFARVNYTFDEKYLFTGTFR
ADGSSKFGENNKYGYFPSFALGWNITKEDFMSNSFFDNLKLRASWGQTGNQEIPSKITKA
SYSEDRLSEGNGSLNTYPIDTDATTLDGYPYGIVFTRLANPDLQWEVSTQIDFGIDFAFF
NHRLTGTLDYFNKVSSNILLEVVPADPVEPTPTYWDNIENMKIHNSGIELALDYASEQRG
DFSYAIGGNVTFINNEVKDSPYSVLTTGAAQGAGQTGATINGYINGEPIGAFYMLQFDGI
SEDGVNRFKDVNGDGEVLDNDRAVVGSAIPKVIYGAHMNFNYKAFDLGLNFNGSAGSKVY
NHTTMSLFTKAQLSRSNNTTDFATQYPEESFNNSNTVSTRFLENGSYFRLNNATLGYNLN
SALIGLGDAFQNIRISVTGQNLFVITDYSGFDPEVNTGSTSGGIQTFGIDRFTYPRARTY
SINLNLTF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaaatttacgtttttctaaggccatgtatgccacggcaggtatggtttttttg
gcggggatagggactgcctttcacccgttaacagcgaaaggcatagggaatgatgttgtt
atggagagaaatactccgctgatggacgtcattgcccaggctaaaaaaatcactggtaag
gttaccgatgatcaaggtgagccactaccaggggcgactgtgcgggtcaaagggacgacc
aacggtaccgtaaccgacatagatggcaatttttccattgaagtggaagagggagctgtg
cttcaggtttcctttgttggttttgttgcacaagaggttccaatagggaatcaggcttcc
ttaagtatccaattggtttcagatgccacacagctggatgaaatggtggttgtgggatat
ggtacccaaaagcgctcggacattactggagccattggttcggtaaaggaaggggatttt
aacaaaggggtgatctctaatcctgtggacttgctacaggggaagatggccggggtaaac
attacctccaccagcggggagcccggagctgcccaaaatgtcattatccgcggtgtggga
agtttgcgttccgggacacaaccgttatatgtactggacggtttcttgttggacaatgcg
gatactgggattgcttccaacccacttaactttctgaatcctggtgatatcgaaagtatc
gaggtgctgaaggatgccagtgctactgcgctttacggatccagggcctccaacggggtg
gtcgtgatcaccaccaaaaaaggtaaatctggcgctacccaaatgaacctttctgcttct
actgcgtggtcttccatggccaataaaatagatgtgttcagtgcagatgagttccgcgag
caagtggtggctgttgggggagatttggaagactttggtggaaatactgattggcaggat
gaactgacacaagtggggctttccaagaatatcaacttctccatgagcggttccaatacc
agtaatttttcctacttcgcttccttaggctatcaagatcaagaaggaatcttgaaaaac
agtgagctggagcgtttttccgggaaattgaacatgaaccagaaggcctttgacggcagg
ctgaatgtcgattataacttaacggcctcacataccaaaaacctgcggccaagcattggc
tctaccatcagtgacatgctgagcctgaaccctacggtgccgacgtatacagacggagag
ccaacgcttctaaataccaatgcgctgaatccattaaagcggtatgagctctacagcgat
gatgctgccaataaccggattttagcgaccatatctccttcttttgagattgtggacggg
cttacgtataagttgaacttgggcgtagattattccagcaccaaccgatatcagcagtac
agaccatactctggcgtgatcaatgaatccaatatttccgatggaaccttggatgaaggg
atcagcgaaaacaccaataagctggtggagaatacccttacctacaactggcataattac
cagcataacttgacggtactggccgggcattcctaccagacctttctggatgagtacagg
ttgacatctgctaggggatttgccgataacaatattgagccacggtaccaagaccacaac
agtaccagcgaatacccgactacggtcagctcttctgccgtaaagaatgagttgcagtcg
ttttttgcccgggtgaactacacctttgacgaaaagtatttgtttaccggtactttccga
gctgatggttcctccaagtttggagagaacaataaatacggctatttcccttcctttgca
ttgggctggaacattaccaaggaagacttcatgagcaattccttttttgataacctgaag
cttcgtgccagctggggacagacgggtaatcaggaaattccttccaaaatcaccaaggca
agttattcggaagaccggttgtctgaaggcaatggtagtttgaatacctatccgattgac
actgatgccactacattggatggctatccttacggaattgtctttacccgattggccaat
ccagacctgcagtgggaggtgtctacccaaattgatttcgggattgactttgccttcttt
aaccaccgactgaccggtaccttggactattttaacaaagtgtcatccaatattctattg
gaagtggtgcctgcagatcccgtggaaccgaccccgacttactgggacaatatcgagaac
atgaagatccacaacagcgggattgaattggctttggattacgcgagcgagcagcgagga
gacttttcctatgccattggcggtaacgtgacctttataaataatgaagtaaaggattct
ccatattccgtattgaccaccggtgctgcacaaggtgcgggccaaacgggcgcaacgatc
aatggctacattaacggtgagccgataggggcattttatatgctgcagtttgatggtatt
tctgaagatggcgtaaatcgcttcaaggatgtcaacggggacggtgaggtgctggataat
gaccgtgctgtggtcggaagtgccattccaaaagtgatctatggagcccatatgaacttt
aactacaaggcatttgacttggggctaaacttcaacggttctgctggaagtaaggtgtac
aaccacactaccatgtcccttttcaccaaagcacaattgtccaggtccaataacacgacg
gactttgccacacaatatccagaggagtcctttaacaattccaatacagtgtctactcgc
ttcctggagaatggttcctatttcaggctgaacaatgctacactgggctataacctgaat
tcggccttgattgggttgggcgatgccttccaaaacattcgcatatcggtaacaggccag
aacttgtttgtgatcacggattactccggcttcgaccctgaagtgaacacaggttccact
tccggggggatccagaccttcggaatcgaccgcttcacttatcctagggccaggacttat
tccatcaaccttaacttgacattttaa
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