Echinicola vietnamensis: Echvi_1032
Help
Entry
Echvi_1032 CDS
T02388
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
evi
Echinicola vietnamensis
Pathway
evi03030
DNA replication
evi03410
Base excision repair
evi03420
Nucleotide excision repair
evi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Echvi_1032
03410 Base excision repair
Echvi_1032
03420 Nucleotide excision repair
Echvi_1032
03440 Homologous recombination
Echvi_1032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
evi03032
]
Echvi_1032
03400 DNA repair and recombination proteins [BR:
evi03400
]
Echvi_1032
Enzymes [BR:
evi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Echvi_1032
DNA replication proteins [BR:
evi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Echvi_1032
DNA repair and recombination proteins [BR:
evi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Echvi_1032
NER (nucleotide excision repair)
GGR (global genome repair) factors
Echvi_1032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
IMS_HHH
DUF3913
HHH
Motif
Other DBs
NCBI-ProteinID:
AGA77303
UniProt:
L0FW82
LinkDB
All DBs
Position
complement(1194131..1196944)
Genome browser
AA seq
937 aa
AA seq
DB search
MPSSNKKKLFLLDAMALIYRAHFAFSKNPRINSKGLNTGIMLGFTNTLLEVIEKQSPSHI
AVAFDTAAPTFRHEQFEAYKANRQEQPEDITVGIPWVKQIVDGFNIPILELDGYEADDII
GTIAKKAEYKDFEVYMMTPDKDYGQLVEEHIFLYKPAFMGNAVDVMGPKEVCAKWEIEDP
DQVRDILGLMGDAVDNIPGIPGIGEKTAKKLLKAYGTIEGLLEHVGDLKGKQKENVENFG
QQGLLSKSLATIKQDVPIEFNPEDLTYDGPDEEKLKALFAEMEFRTLTQRVFGEKMKKPA
VKVNEQLGLFTGPAEDAEEEEVEEANPIPVPDQLATVTSMVHAYHKVEGLAAIKELVEYL
EIQDEFCFDTETTDLDPNKAELVGLSFAYVPGEAFYIPVPADQEETKKLLEPLRGVFEDE
SITKIGQNIKYDALVLKNYGIALKGKLYDTMLAHYLIEPEGKHNMDWLAEHYLQYRPVSI
ETLIGKKGKSQGNMRDADVDKVVEYASEDADITLQLAQKLNPDLKERGLEKLFYEVETPL
IPVLTAMEYEGVKIDKESLAELSTALEKDITEIEARVYDLAGVKFNLASPKQLGEVLFVK
MELDPKAKKTKTGQYATGEEVLSKLAPKHEIARAILDYRELVKLKNTYVDTLPTLINPKT
DRIHTTYNQVVAATGRLSSINPNLQNIPIRTERGREIRKAFVPRDEAHVILAADYSQIEL
RIMAAFSKDESMMEAFREGRDIHSTTAAKIFQVPLEEVTSEMRRKAKTANFGIIYGISAF
GLSQRLNIPRGEAKEIIDAYFKEFPAVSQYMNDCIEKARKNEYVETILGRRRYLRDINSR
NATMRGYSERNAINAPIQGSAADMIKVAMIHVHQWMLEKQLKSKMILQVHDELVFDAHKD
EVDLLKKEIPKLMTKALEIEVPMQVEVGVGKDWLEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcccagttccaacaagaaaaaactctttctcttagacgccatggccctgatctatcgg
gcccactttgcttttagcaaaaacccccggatcaattccaaaggactgaataccggaatc
atgcttggttttaccaatacccttttggaagtaattgagaagcaatcgcccagtcatatt
gccgtcgcttttgatacggctgcccctacttttcgacatgagcagtttgaagcgtacaag
gcaaacaggcaggagcaaccggaagatattacggtgggcattccatgggtaaagcaaatt
gtggatgggtttaacattccgatcttggaactggatggctacgaggccgatgatattatc
ggaacgatagccaaaaaggcagagtataaggattttgaggtatacatgatgacgcccgac
aaggattatgggcaattggtagaagagcatattttcctttataagcctgcttttatggga
aatgcagtggacgtcatggggccgaaggaggtttgtgccaagtgggagatagaagatccc
gatcaggtaagggatatcttgggcctcatgggtgatgctgtggataacattcccggcatt
cccgggattggtgaaaaaactgccaaaaaactcctgaaggcctatggtaccatcgaagga
ttgctggagcatgtgggtgacttgaagggcaagcaaaaggaaaatgtggaaaactttggc
cagcaagggctgctttccaaatccctggccacgatcaaacaagatgtgcccattgagttt
aatcctgaagatttgacctatgatggccctgatgaagaaaagctcaaagcgctatttgca
gaaatggaattcaggacattgacgcagcgggtttttggagagaaaatgaaaaagcctgcc
gtcaaagtgaatgagcaattgggactttttacgggacctgctgaagatgcggaggaggaa
gaagtggaggaagccaatcctattccagtgccggatcagttggccacagtgacttccatg
gtgcatgcatatcataaggtggaagggttggccgccatcaaggaattggtcgagtacttg
gaaatccaggatgaattttgctttgacactgaaaccaccgatctcgatcccaacaaagct
gagttggtgggcttgtcgtttgcctatgtgccgggagaggcgttctatattccggtgccg
gctgatcaggaggaaaccaaaaagctattggagccattgcgaggggtttttgaagatgaa
agcatcaccaaaattggccaaaatatcaaatacgatgcgttggtgcttaaaaactacggg
atagcgctgaagggtaaactttatgataccatgctggcacattacctgatcgagccagag
ggaaagcacaacatggattggctggcggagcattatttgcagtaccggcccgtatccatc
gaaaccctgattggcaagaagggaaaatcccagggaaacatgcgtgatgccgatgtggat
aaagtggtcgaatatgcctcagaagatgctgacatcaccttgcagctggcacaaaagcta
aatccagatttgaaagagcggggtttggaaaagctattctatgaagtggaaacgcctttg
attcctgtgctgacggcgatggagtatgagggtgtcaagattgataaggaaagtttggcg
gagttatccacagcccttgagaaagatattacggagatcgaagcccgtgtttatgatttg
gcaggagtgaaatttaacttggcttctccgaagcaattgggagaggtgctctttgtgaaa
atggagcttgatccaaaagccaagaagaccaagactggccaatatgctaccggtgaagag
gtgctgtccaagcttgcacccaagcatgaaatagcacgggccattttggattatcgggag
ttggtaaagctaaagaacacgtatgtggataccttgcccactttgatcaatcctaaaact
gatcgcattcatactacttataatcaggtagttgctgctacgggcaggctatcgtctatc
aatcccaacttacagaatatccccattaggacggagcgaggtagggaaatcagaaaggct
tttgtgccgcgtgatgaagcgcatgtgattttagcggcggattacagtcagatcgaattg
cgtattatggcggctttttccaaggatgagtccatgatggaagcatttagggaaggaaga
gatatccacagtaccacggctgccaagatcttccaggttcccctggaagaagtgaccagt
gaaatgcggcgaaaggccaagacggccaacttcggcatcatttacggcatttctgctttt
ggcctgtcgcagcggcttaacatcccacggggagaggccaaggagataatagatgcctat
ttcaaggaattccccgccgtgagccagtacatgaatgactgcatagaaaaggcacgtaaa
aatgaatacgtggaaaccatccttggccgacgccgttaccttcgggatatcaacagccga
aatgctaccatgcgcggctactctgagcgaaatgcaatcaatgctcccatccaaggaagt
gctgccgatatgatcaaagtggccatgatccatgtgcatcaatggatgcttgagaagcaa
ttgaagtccaagatgatccttcaggtgcatgatgaattggtttttgatgcccataaggat
gaagtggacctgttgaaaaaggaaattccaaaactcatgaccaaggcattggagatcgaa
gtacccatgcaggtggaagtaggtgtaggaaaagattggctggaagcccactag
DBGET
integrated database retrieval system
