Echinicola vietnamensis: Echvi_1866
Help
Entry
Echvi_1866 CDS
T02388
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
evi
Echinicola vietnamensis
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
evi02000
]
Echvi_1866
Transporters [BR:
evi02000
]
Other transporters
Pores ion channels [TC:
1
]
Echvi_1866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
A2M_BRD
Motif
Other DBs
NCBI-ProteinID:
AGA78121
UniProt:
L0FZE9
LinkDB
All DBs
Position
2186936..2190040
Genome browser
AA seq
1034 aa
AA seq
DB search
MDSTFTKCIRLTYGRAAGKESMKWVVLLVLVLVAHLSKAQNVSVSGMVLDENGLGLPGAA
VQEKGTTNGVVTGLDGDYTIAVQEGATLVFSFLGYKPQEITVGNQTSIDVELEPDMGSLD
EVVVVGYGTLRQEAVTGSVASIDGDQMREVASANVTQALQGRLPGVDISQTSTQPGATMQ
IRIRGNRSLTASNDPLIVLNGIPFAGSIGDINPEDIESIDVLKDASATAIYGSRGANGVI
LITTKKGTKGQVAKVSYNGFYGPKAVFAKYPMMNGPEFIAMREAAGLYTNGADESNDVNT
DWQDLFYQTGVMTSHDVNVTGGGERSTYSFGVGYYHDEGVVPTQQYDRFSLRASVDQEIG
RYFRIGFNSNSNYNERQGSQVGLYNTLSMSPIASPYEDDGTPRRTINMPLDESWVMTKDV
LNNVQDQWLNETRAYATYNALYGEFKIPGVDGLKYRMNVGLDYRQSNQGEYTGKGINSAN
PETPSTAAVGNSHTYHWIVENLLTYDKTFADKHIVNVTALYSAEQNKYYRSRMSARDIPS
DQFQFYNLGYANGEIQVNPGDQQYQLWGLKSVMGRVMYSYDDRYMISATLRSDGSSRLAP
GHKWHTYPAISAGWNIGDESFMSGVPFVNMLKLRAGYGQTSNQAIAPYATLGGLGTRPYN
YGNDTYATGYFVNALPNPNLGWEYSETLNLGLDFRLFNHRLSGTVEYYVTNTKDILLGVN
LPGTAGVSSYTANIGETQNKGVEVSLNGTIIESNDWTWEAGVNLYANRNELVSLASGQKR
DEGNWWFVGHPINVIYDYEYQGLWQEGDPYRDVLEPGGNLGMIKVKYTGGYEEDGTPSRA
IGPDDRQILDLQPNFMGGFNTRVAYKNFDLSLVGAFKSGGILISTLHSSTGYLNMLSGRR
NNVQVDYWTPDNTGARYPAPGGLASGDNPKYGNTLGYFDASYLKIRTMTLGYNFNRESNW
MDKAGISRFRMYASVQNPFVLFSPFHKESGMDPETNSYGDENAAITNNYPNRLLTIGTNS
PATRNFIIGLNLTF
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggactctacctttaccaagtgcattcggttgacctatggccgagcagcaggaaaggag
tcgatgaagtgggtggtattgctggtgcttgtgctggtagcccatttgtcaaaggctcaa
aatgtatcagtatcaggaatggtgctggatgagaatggactggggctgcccggagcggcc
gtacaggagaaaggaaccaccaatggcgtagtcacgggactggatggtgattatactatt
gctgttcaggaaggagcgacattggtgttttcgtttttgggctataagccccaggagatc
accgtcggtaaccaaacgtccatcgatgttgaattagagcctgacatgggatctttggat
gaagtggtcgtagtggggtatggtaccctgcgccaagaagcagtcacaggttctgtggca
tcgatagatggtgatcagatgagggaagtggcttcggcaaatgtaacccaagccctgcaa
gggcgtcttccgggggtagacatctcccagacttctacgcagccaggtgctaccatgcaa
atccgaattcggggcaatcgctcacttaccgccagtaatgatccgctaattgtactaaat
gggattccgtttgcagggtctattggtgatattaatccagaggatattgaaagtatcgat
gtcctgaaagatgcttccgctacggcaatttatggttcacgcggtgccaatggagtaatt
ttaatcactaccaaaaaaggcaccaagggccaagtagccaaagtgagttataacggtttt
tatggcccaaaggctgtttttgcgaagtatccgatgatgaatggtcccgaatttatcgct
atgcgggaagctgccgggttatataccaatggggcagacgagtcaaatgacgttaataca
gactggcaggacttgttttatcagacgggtgtcatgacaagtcacgatgtcaatgtcaca
gggggaggcgagcgaagtacgtatagctttggagtaggctactaccatgatgaaggagtg
gtgccgacccagcagtatgatcgtttttccttgcgggcatcagtagaccaagagattggt
cggtattttaggattggttttaactccaacagtaattataatgagcgtcaaggttcgcaa
gtaggactgtataataccttgagcatgtcgccgattgcatctccttacgaagatgatggc
acccccagaaggaccatcaatatgcctttggatgagtcttgggtgatgacaaaagatgtg
ctcaacaatgtgcaagaccaatggctaaacgaaaccagggcttatgccacttacaatgcc
ttgtatggtgaatttaaaattccgggcgttgatggattaaaatataggatgaatgtaggg
ctggattatcggcaaagcaaccaaggcgaatacacaggaaaggggataaacagtgccaat
cccgagactccttccacggccgcagttggcaattctcatacctatcattggattgtggaa
aacctattgacttatgataagacgtttgctgacaagcacatcgtaaatgtaacggccctt
tactctgctgagcaaaacaaatactatcgctcaaggatgtcagcaagggatattccttcg
gaccagttccaattctacaatttaggctatgccaatggtgagatccaggtaaatccagga
gaccagcaatatcagttgtggggattaaaatccgttatggggagagtaatgtattcttat
gatgaccgttacatgatttctgcgacgttgagatcagatggttcatcgagacttgcgcca
ggtcataagtggcatacctacccggcgatttctgcaggatggaatattggggatgaatca
tttatgagtggcgtgccttttgtcaatatgttgaaattacgtgcagggtacgggcagaca
tccaatcaggccattgctccttatgctactttggggggcttgggcacgcggccatataat
tatggtaacgatacctatgctaccggttattttgtaaacgcccttcccaatcccaatctc
ggatgggaatattccgaaacattaaatttaggccttgacttccggttgtttaatcaccgt
ttatcgggtacggtcgaatattatgtgaccaataccaaggacattctgttgggcgtaaat
ctccccggtactgctggagtgagcagttataccgccaatattggagaaacccagaacaaa
ggagtggaggtatctctaaatggtaccattatcgaaagcaatgattggacttgggaggca
ggagtaaacctctacgccaatcgtaatgagctggtttccttggcttctggccagaaaaga
gatgaaggtaactggtggtttgtggggcatcccattaatgtgatttacgattatgagtat
caaggtttatggcaagaaggtgatccttacagggatgtgttagaaccagggggcaatctg
ggaatgatcaaggtgaaatatacaggagggtatgaggaagatggcacgccttcgcgtgcc
attgggcctgatgatcggcagatcctagacctacagccaaatttcatgggaggttttaat
acccgtgtggcgtataagaattttgatcttagccttgtaggggcatttaaaagtggagga
atattaatcagtacgctacattcctctacaggctaccttaacatgctaagtgggcgacgg
aataatgtccaggtagactattggacacctgacaatacaggagcaaggtatcctgcaccc
ggcggcctggccagtggtgataatcctaaatatggaaataccttaggctattttgatgcc
tcttacttgaaaatcaggaccatgacgctgggctataactttaaccgcgaaagcaactgg
atggacaaggccggtatcagcaggtttaggatgtatgcctcagtgcagaatccgtttgtg
ttgttctcgcctttccataaggaatcaggaatggatccggagaccaattcctatggtgat
gaaaatgccgcgataaccaataattatcctaaccgactgttgaccattggtaccaactcc
ccggcaacgcgtaattttattataggtttaaacttgacattctaa
DBGET
integrated database retrieval system
