Echinicola vietnamensis: Echvi_2078
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Entry
Echvi_2078 CDS
T02388
Name
(GenBank) small-conductance mechanosensitive channel
KO
K16052
MscS family membrane protein
Organism
evi
Echinicola vietnamensis
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
evi02000
]
Echvi_2078
Transporters [BR:
evi02000
]
Other transporters
Pores ion channels [TC:
1
]
Echvi_2078
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AGA78330
UniProt:
L0G0C8
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Position
2450804..2452465
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AA seq
553 aa
AA seq
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MVVRFRFLLLGWLLLVSNVLYGVDGEFDKDFPQIQDTASYVNLSTPYTTTLTFFLNLEER
NFKPENAAKTLGGDLTPEQARKQVVKLKQIFDGQGVFVDVDNVPNEANYTDSTRSYQAKY
FYDNNRLPKIFLEKTGDKWKFSSYTVSQINELHKETYPYGTAKLLNLLPKIGQQVYLGLH
LWQLCGIFLLVLFVFTAHKLFTFIVDRGMFHVSLKLGYKQVAETYLLPVARVISIYFVVL
LVDIFIRVLQLPIEVVSWIVILLNAAKPLIITIVFYKLADLLSAYFERQADKTESNLDDQ
LVPLVRKTLKAFIIIVGSLFILKNGLQVDIWPFLTGLSIGGLAFALAAQDTIKNFFGSVM
IFIDKPFQVGDWITSGDVDGTVEEVGFRSTRVRTFRNSLMYIPNGRIADATIDNHGLRQY
RRFSTTITITYGTPPELINVFVEGLREIVKNHPLTRKDFYNVYFNNMSAYSLDIMFYVFF
EVPTWGDELKGRHEILIQIVKLANELGVNFAFPTQTLHMETFPEKEGLSPIYEDNADAYK
QRLDAFIKKEMKK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgcgatttagatttcttttacttggatggttgcttttagtgagcaacgttctg
tatggggttgatggtgaattcgataaggattttccccaaatacaggacaccgcttcttac
gtcaacctgtctaccccctataccactacgctgacctttttccttaacctggaagaaagg
aattttaaacctgaaaatgcagcaaaaaccttgggaggagatttaactcccgagcaagcg
agaaaacaggtggttaagctcaagcaaatttttgatgggcaaggggtttttgtggatgtg
gataatgtgcccaatgaggcaaactatacagattctaccagaagctaccaagccaaatac
ttttacgataacaacaggctgccgaagatattcctggagaagacgggagacaaatggaag
ttttccagttataccgtttcccagatcaatgaactgcataaggaaacttatccgtatggg
accgccaagctgctgaacttgctgcccaaaattggccaacaggtatatttgggattgcac
ttatggcaattgtgtgggatatttttgctggtgctctttgtctttacagcccataagctg
tttacatttattgtggatcgggggatgtttcatgtttcgcttaagctcggctataagcaa
gtggcggaaacctacctgcttccggtggcacgtgtaatcagcatttattttgtagtactc
ctggtcgatatctttatacgcgtattgcagctgccgatagaggtggtgtcatggattgtc
atcttgctgaacgcggcaaagccacttatcataaccatcgtattttacaaattagcagat
ttgttgtcagcctactttgagcggcaggcagacaagacagaatccaatttggacgatcaa
ttggtacccttggtgaggaaaaccttaaaggcttttatcatcattgtaggttcgctgttt
attcttaagaatggactgcaggtagatatttggccatttttgacgggactttccattggt
ggcttggcctttgccttggccgcacaggataccataaagaatttctttggctcggtgatg
attttcatcgacaagccttttcaggtaggtgattggattaccagtggggatgtagacgga
acggtagaggaagtagggtttcgttccacccgggtacgtaccttcagaaattcactgatg
tacattcccaatggccggatcgccgatgccacgatcgataaccatgggctccgccaatac
aggcgattttccacaacgattaccattacttacgggactcctcctgagcttataaatgtg
tttgtggaaggtttgcgtgaaatcgtaaaaaaccacccgcttaccaggaaggacttttat
aatgtgtactttaataacatgtccgcttatagcctggatatcatgttttatgtgtttttt
gaagtgcctacttggggagatgaattaaaaggaaggcatgaaatccttatccagatcgtc
aagctggccaacgagctaggggtgaactttgcattccccacgcagacattgcacatggaa
acattcccggaaaaggaaggactgtcgccgatttatgaagacaatgccgatgcctacaag
cagcgactggacgcctttatcaaaaaggaaatgaagaagtag
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