Echinicola vietnamensis: Echvi_2313
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Entry
Echvi_2313 CDS
T02388
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
evi
Echinicola vietnamensis
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Echvi_2313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
evi03019
]
Echvi_2313
03009 Ribosome biogenesis [BR:
evi03009
]
Echvi_2313
03036 Chromosome and associated proteins [BR:
evi03036
]
Echvi_2313
Enzymes [BR:
evi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Echvi_2313
Messenger RNA biogenesis [BR:
evi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Echvi_2313
Ribosome biogenesis [BR:
evi03009
]
Eukaryotic type
90S particles
RNase
Echvi_2313
Prokaryotic type
rRNA processing factors
Echvi_2313
Chromosome and associated proteins [BR:
evi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Echvi_2313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
T7SS_EccA1_N
Motif
Other DBs
NCBI-ProteinID:
AGA78561
UniProt:
L0G0P8
LinkDB
All DBs
Position
complement(2748279..2749022)
Genome browser
AA seq
247 aa
AA seq
DB search
MKIFRKLRLHELLYNKKDKRLAAAIKLMVGSKPLNLSLYKLAVRHSSAAEEIKHGVKASN
ERLEFLGDAVLGTVVAEHLFMKFPYRDEGFLTETRSRIVNRESLNRVGQKIGLSNIVESD
LSDKGLYSHKSIYGDTLEALVGAVYLDRGYIFCRQFILSKILSPYFDLDNIITTVTNFKS
KIIEWSQRENKEVEFFLQSVTGTQRFKEFTIELKVEGEVFTEGKGPTKKKAEQEAAKNAF
EKLKLAL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatatttcgaaaactcagattacacgaactactttataacaaaaaagataaaagg
cttgctgctgccatcaagttaatggtcggcagcaagcctttgaatttatctttatataaa
ctggccgtgcgccattcctctgctgcagaagaaatcaaacatggcgttaaagcttctaac
gagcgcctggaatttttaggtgatgcggtgctgggaactgtcgtggcagagcaccttttc
atgaagtttccttatcgggacgaaggctttcttacggagacgcggtcacgaatcgtcaac
cgggaatcgctcaaccgggtaggacaaaaaataggtctttccaacatcgtcgaatccgac
ctgtccgataaaggcttatattcgcacaaatccatttatggtgacaccctagaagccctc
gtgggtgcggtatacttggaccgaggatatattttttgtcgtcaatttatcctgagcaag
atcctttccccttactttgaccttgataatatcatcaccacagtcacgaacttcaaaagt
aagatcatcgaatggtcgcaaagggagaacaaggaggtagagttctttctgcagtccgtt
accggaacgcagcgatttaaggaatttacgatcgaactgaaggtcgaaggagaggttttc
accgaaggaaaagggcctacaaaaaagaaagccgagcaagaagccgcaaaaaatgctttc
gaaaaactaaaattggccttatag
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