Echinicola vietnamensis: Echvi_2366
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Entry
Echvi_2366 CDS
T02388
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
evi
Echinicola vietnamensis
Pathway
evi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Echvi_2366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
evi03019
]
Echvi_2366
03110 Chaperones and folding catalysts [BR:
evi03110
]
Echvi_2366
03029 Mitochondrial biogenesis [BR:
evi03029
]
Echvi_2366
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
evi04147
]
Echvi_2366
Enzymes [BR:
evi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Echvi_2366
Messenger RNA biogenesis [BR:
evi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Echvi_2366
Chaperones and folding catalysts [BR:
evi03110
]
Heat shock proteins
HSP60 / Chaperonin
Echvi_2366
Mitochondrial biogenesis [BR:
evi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Echvi_2366
Exosome [BR:
evi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Echvi_2366
Exosomal proteins of other body fluids (saliva and urine)
Echvi_2366
Exosomal proteins of breast cancer cells
Echvi_2366
Exosomal proteins of colorectal cancer cells
Echvi_2366
Exosomal proteins of bladder cancer cells
Echvi_2366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
AGA78614
UniProt:
L0FXJ1
LinkDB
All DBs
Position
complement(2804497..2806128)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKELFFDTDAREKLKKGVDALAEAVKVTLGPKGRNVIIDKKFGAPTITKDGVSVAKEIE
LEEPIENMGAQLVKEVASKTADNAGDGTTTATVLTQSIFNVGIKNVAAGANPMDLKRGID
KAVAAVVAELKATSKPISTSKEIAQVGTISANNDEEIGNMIADAMDKVGKDGVITVEEAK
GTETEVKTVEGMQFDRGYLSPYFTTNTEKMEAELENPYILIYDKKISSMKELLPVLEPVA
QSGKPLLIIAEDVDGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAILTGGTVI
SEERGYKLENASIEYLGTAEKVNIDKDNTTIVNGAGEKSTIEARISEIKTQIEKTTSDYD
KEKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVQEGVVVGGGVALIR
ASSALDGLKGENDDQDTGINIIKQAIESPLRSIVANAGAEGSVVINKIKEGTGNYGYNAR
TDKFEDLFEAGVIDPTKVTRLALENAASIAALLLTTECVVADVKEEGGQPAPPMGGGGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaattatttttcgataccgatgcaagggaaaagctgaaaaaaggcgtagac
gctcttgcagaagcagtaaaagtaacattgggaccaaaaggtcgtaatgtcatcattgac
aaaaaattcggtgcccctaccatcaccaaagatggggtgtctgtagcgaaagaaatcgaa
ctggaggagcctatcgaaaacatgggtgcccagctcgttaaagaagtagcttccaaaact
gctgacaatgcaggtgacggtaccactaccgccaccgtattgacccaatccatcttcaac
gtaggcatcaaaaacgtagctgccggcgccaatccaatggacctcaaaagaggtattgat
aaggccgtagctgctgtagtagctgagctaaaagctacctccaaacctatctccacttcc
aaggaaatcgcgcaagtgggtaccatctctgccaataacgacgaggaaatcggcaacatg
atcgctgatgccatggacaaagtgggcaaagacggcgtaatcaccgtagaagaagccaaa
ggtacggagacagaagtaaagacagttgaaggtatgcagtttgacagaggctacctttct
ccttacttcactaccaataccgaaaaaatggaagcggaactggagaatccatacatcctt
atctatgacaagaagatttcttccatgaaggaattgcttcctgtccttgagccagtagct
cagtcaggcaagcctcttttgatcatcgctgaagatgtggatggtgaagcccttgctact
ctagtagtgaacaaaatcaggggagcactgaaagtagcagctgtaaaagctcctggtttc
ggtgacagaagaaaagcaatgctggaagatatcgccatccttacaggtggtactgtaatc
tctgaagaaagaggttacaaacttgaaaatgcttccatcgagtatttgggtactgccgag
aaggtaaacatcgataaggataacaccacgatcgtcaatggtgccggtgaaaaatccact
atcgaagcaagaatctctgaaatcaaaactcagatcgaaaaaaccacttctgactacgac
aaagagaaactgcaagagcgacttgctaagctttctggtggtgtggccatcttgtacatc
ggtgcagctaccgaagtggaaatgaaagaaaagaaagaccgtgtagacgatgcccttcac
gcgaccagagccgctgtgcaagaaggtgtagtagtcggtggtggtgtagccctcatcaga
gcctcttctgcccttgacggacttaaaggcgaaaatgacgaccaggacactggtatcaac
atcatcaagcaggcgatagagtctccattgagatccatcgtggccaatgccggtgctgaa
ggttctgtggtgatcaataagatcaaagaaggaaccggtaactatggctataatgccaga
acagataagtttgaagacctgtttgaagccggtgtaatcgacccaaccaaggttacccgt
ctagcgcttgaaaatgccgcttccatcgcagccctactacttactaccgaatgtgtggta
gcggatgtgaaagaagaaggcggccagccagcacctccaatgggcggcggcggaatgggc
ggcatgatgtaa
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