Echinicola vietnamensis: Echvi_2382
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Entry
Echvi_2382 CDS
T02388
Name
(GenBank) primosomal protein N''
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
evi
Echinicola vietnamensis
Pathway
evi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Echvi_2382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
evi03400
]
Echvi_2382
Enzymes [BR:
evi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Echvi_2382
DNA repair and recombination proteins [BR:
evi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Echvi_2382
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
nSTAND3
nSTAND6
AAA_19
NPHP3_N
Zn_ribbon_6
GpP-like_1st
Zeta_toxin
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGA78630
UniProt:
L0G1B5
LinkDB
All DBs
Position
complement(2824055..2826577)
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AA seq
840 aa
AA seq
DB search
MEDLFGDSIPLDESTHPSTFADVILPVPIPRMFTYRIPRTMEKSIGIGHRVIVQFGRKKV
LTGIIGKVHQKPPKDYETKAILEVLDDQPVVNPLQIKFWFWMAEYYCCQIGEVMNAALPS
GLKLSSESKIQLNPTFDPEASDFPIDDREQIILDALEKNDALTYEDCGKLLGIKSSYQII
KSLVIKEAVLVYEQVKEKYAPKVESRIKLKAPYSTSKKALEALFDQLSKNTKQEEILLKF
LQEIPVFHAPERNEKGLEKKVITDAGLSPSSLKTLIKNDILEEFKVIVSRFENLPSDDRE
IKLADFQEEGLSSIKEQFDQKQTVLLHGITGSGKTEIYIHLIREVLDSGSQVLLLLPEIA
LTTQIVSRLQKVFGSEMGIYHSKHSDNERVEVWQGVLSGRFSFVVGVRSAIFLPFDSLGM
IIVDEEHEPSYKQFDPAPRFQARDAAIMLSWLHQSKTLLGSATPSYESFYNARTQKYGYV
HLSKRFGEAQLPEFHVADILVDKKKNLLKLDFTRIMREKIQEALDRQEQILIFQNRRGYA
PYMSCEECGWIPECEHCDVNLTYHQYSEEMRCHYCGFKEKVPRACPACGSHKLTTVGIGT
ERLEESLSLLFPEARVGRMDLDTTRSKYAYQRIFDEFSSGNLDILVGTQMITKGLDFDRV
TVVGIVDADRILYFPDFRSGERAFQQITQVAGRAGRRNRRGNVVIQTRRPDHEVFEKVIQ
GNFSEFYLTEMAERKRFFYPPFVKNVKITSRHKEAKVAEKAAINLANLLKDIPVKKIILG
PERALIGKIKNQYLFDIYIKLDRAGNTPAIFKHEMGKILFELNTQKAFKSVRFVVDVDPY
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
ttggaagacctttttggagatagcataccccttgatgaaagtacccatccatctacgttt
gcagatgtgattcttcctgtccccattcctcggatgttcacctaccgcatcccccgaaca
atggaaaaatccatcggcatcgggcatcgggttattgtgcagtttggccgcaagaaagtc
cttacgggaattatcggaaaagtccatcaaaagccgccaaaagattatgagaccaaggcg
attctggaagtcctggatgatcagccggtggtcaatccccttcagataaaattttggttt
tggatggctgaatattattgctgccagatcggggaagtgatgaatgcagccctgccttca
gggctaaaactgagcagtgaaagtaaaatccaattgaacccaaccttcgacccagaggct
tctgatttcccgatagacgacagagagcaaatcatcttggatgctttggaaaaaaatgac
gccctcacttacgaggattgcgggaaacttttgggcattaagtccagctaccaaatcatc
aaaagcttggtcatcaaagaggcggtattggtatacgagcaagtcaaggaaaaatatgcc
ccaaaagtagaaagcaggataaagctcaaagcgccctattccacctccaaaaaagccctt
gaggcattatttgaccagctaagcaagaacaccaagcaagaagaaatccttttaaaattc
cttcaggaaatcccggtctttcatgccccggaaaggaatgaaaaaggcctggagaaaaag
gtcattacggatgctggactcagccccagttccctgaaaaccttgataaagaatgacatt
ttagaggagttcaaggtaattgtcagcaggtttgagaacctgccctctgacgaccgagaa
attaaacttgcagatttccaggaggaaggactatccagcatcaaggagcaatttgaccaa
aagcagaccgtgctgctgcatgggatcactggaagtggcaaaacagaaatatacatccac
ttgatccgtgaggtattggacagtggctcacaggtattgctgctgctgccggagattgcc
ttgaccacccagattgtcagcagactccaaaaggtctttggtagtgaaatgggcatttac
cattccaagcattccgacaatgaacgcgtggaagtttggcagggcgttttgagtggacgt
ttttcgtttgtggtcggcgtgagatcggccattttccttccctttgacagcttggggatg
atcattgtcgatgaagagcacgagccatcctacaagcaatttgacccagcgccgcgtttt
caagctcgggatgcggccatcatgctatcctggctgcaccaatccaagaccctccttggc
agtgccaccccttcctacgagtccttctacaatgcccgcacccaaaaatacggttacgtt
cacctcagcaagcgctttggagaagctcagctgcctgaatttcacgtggcagacatcttg
gtagacaagaagaaaaatctgctcaaactggatttcacacgaattatgcgcgaaaaaatc
caagaagccctggaccgtcaagagcaaatcctcattttccaaaaccggcggggctatgct
ccatatatgtcctgcgaggaatgtggatggatcccggaatgtgagcattgcgatgtcaac
cttacttatcaccagtacagcgaagaaatgcgctgccactactgtggctttaaggaaaag
gtgccccgggcttgccctgcgtgcggaagccacaagctgacgacagtaggcattggtacg
gagcgcttggaagaaagcctttctttactcttccccgaagccagggtagggagaatggac
ttggacactaccagaagcaaatatgcctatcaacgtatcttcgatgaattttcctccggg
aacctcgacatcttggtgggcacccaaatgatcaccaaggggctggatttcgaccgggtc
acggtagtgggcatcgtggacgctgaccgtattttgtacttcccggatttcagatctggg
gaacgggcctttcagcaaatcacccaagtggccggaagggctggaaggcgaaatcgtcgc
ggaaatgtggtcatacagaccagaaggccagaccatgaggttttcgaaaaagttatccaa
ggaaacttttcggaattttaccttaccgagatggcggagagaaagcgttttttctatccc
ccctttgtcaaaaacgtcaaaatcacttcaaggcacaaagaagcaaaggtagcggaaaaa
gccgccataaacctggccaatttactcaaggatatccctgtaaaaaaaatcatccttggt
cccgagagggctttgatcggaaaaatcaaaaaccaatatttattcgatatctacatcaag
ctggacagagctggcaacacccctgccattttcaaacatgaaatgggcaaaatcctcttt
gaactcaacacacaaaaagcattcaaatcggttcgttttgtggtggatgtggatccgtat
tga
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