Echinicola vietnamensis: Echvi_2564
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Entry
Echvi_2564 CDS
T02388
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
evi
Echinicola vietnamensis
Pathway
evi03030
DNA replication
evi03430
Mismatch repair
evi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Echvi_2564
03430 Mismatch repair
Echvi_2564
03440 Homologous recombination
Echvi_2564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
evi03032
]
Echvi_2564
03400 DNA repair and recombination proteins [BR:
evi03400
]
Echvi_2564
Enzymes [BR:
evi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Echvi_2564
DNA replication proteins [BR:
evi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Echvi_2564
DNA repair and recombination proteins [BR:
evi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Echvi_2564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DUF7508
MciZ
Motif
Other DBs
NCBI-ProteinID:
AGA78806
UniProt:
L0G1B7
LinkDB
All DBs
Position
complement(3040834..3042207)
Genome browser
AA seq
457 aa
AA seq
DB search
MIYAIVDIETTGGYGKRHRITEVAAVAHNGSQILDSFQTLINPDCEIPGFITGLTGIDQS
MVEGAPYFEDIADELYAFLEDKIFVAHNVNFDYQFIRSEFERIGKSFDRPKLCTVRLSRK
IFPGLRSYSLGRICEHKNIEIKSRHRAFGDAEATAELFTKLLLADQEGIVEQLLKRNSGE
AFLPPNITKEQFLSLPESIGVYYFHDANGKVIYVGKALNIRHRFKGHFSGAGKGKQGMKS
AIYDVSFQLTGSEFLALLVEALEIKQHWPKYNRAQKAKNAPWGIYRYQDGQGFERFQVAK
INRFTKPLLAFHSHHEAWSYLLEKIEKHQLCAKLCGVQKSASACFDHQAGACLGACCGEE
EPSSYNTRVEDWLQEIQREKSRLLIREKGRHPNEQAAIYFEDGVLKAYGFIDSEAEFDTD
EAVIDQLEMVKPVGDTSSILAQYLSKNLMKKVVVLPS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatatatgccattgtagatattgagacgacaggaggttatggaaaaaggcaccgcatt
accgaagtggcggctgtggcccacaacggcagccaaatcctggattcctttcaaaccttg
atcaacccagactgtgaaatccccggtttcattacaggactgaccggcatcgatcaatcc
atggtggaaggagcgccttacttcgaagatatcgcagatgagctctacgcctttctggaa
gacaaaatattcgtagcgcacaatgtgaacttcgactatcagtttatccgatcggaattt
gaacggatcggaaaatcttttgaccgtccgaagctttgcacggtcaggttgagcagaaaa
atctttccgggcctgagatcctatagccttggccgcatatgtgagcataaaaacattgaa
attaaatctcgtcaccgcgcctttggtgatgcggaggccactgctgaactgtttaccaaa
ctgttacttgcagaccaagagggcatagtggagcaattactcaaaagaaactcgggagaa
gcatttttaccgcccaatattaccaaggaacaatttttatccctgcccgaaagtattggg
gtctactactttcatgacgccaatggaaaagtaatttacgtcggcaaagccctcaatatc
cgtcatcgcttcaaggggcatttttcgggagcaggaaaaggcaagcaaggcatgaagtca
gccatttatgatgtcagtttccaattgaccggcagcgaattccttgccctgctggtggaa
gcactggagatcaagcaacactggccaaaatacaaccgcgcccaaaaagcaaaaaatgcg
ccttggggaatttacaggtaccaagatggtcaaggcttcgagcgcttccaagtagccaag
atcaaccgcttcaccaaacctcttttggcctttcattcgcatcatgaagcttggtcatac
ctgctggaaaagatcgaaaagcatcagctatgcgctaaactttgcggagttcaaaaatca
gcttctgcctgctttgaccatcaggccggggcatgcctaggggcttgctgtggagaagag
gaaccctcctcgtataatacacgggtagaagattggttacaggaaatccaacgtgaaaaa
agccgcctgctgattcgtgaaaaaggccgtcacccaaacgaacaagccgccatctatttt
gaggatggcgtcctaaaggcctatggctttatcgatagcgaagctgaattcgatacggat
gaagcagtaatcgaccaactggaaatggtaaaacccgtcggcgacacgtcctctatcctc
gcccaatacctaagcaaaaaccttatgaaaaaagtagtggtgcttccctcatga
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