Echinicola vietnamensis: Echvi_3274
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Entry
Echvi_3274 CDS
T02388
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
evi
Echinicola vietnamensis
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
evi03016
]
Echvi_3274
Enzymes [BR:
evi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Echvi_3274
Transfer RNA biogenesis [BR:
evi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Echvi_3274
Prokaryotic type
Echvi_3274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
HMA
Motif
Other DBs
NCBI-ProteinID:
AGA79498
UniProt:
L0G2H6
LinkDB
All DBs
Position
complement(3879038..3879712)
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AA seq
224 aa
AA seq
DB search
METPYGEVFLVNKPYRWTSFDVVKKIRNTLKIKKVGHAGTLDPLATGLLIICAGKKTKSI
NDYMGQEKEYTGTFVLGKTTASFDLEQEVEVVADPSHLTLEAIQEACKSLTGDIMQVPPT
HSAIKKDGKRVYESARKGIDVKLDPRPVTVFVFEITRCELPEIDFRIVCSKGTYIRSLAR
DLGEALQVGAYMSALTRTRIGDSHLSDASEIDEIVEKIKGEAHS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaccttacggagaagtatttctggtcaacaagccataccgctggacctctttt
gatgtggtcaagaagatcaggaataccctcaaaatcaaaaaagtaggccatgcgggcacc
ttggatccgctggcaacaggattattgatcatttgtgctggcaaaaagaccaaaagcatc
aatgactatatgggacaggaaaaggaatacaccgggacctttgtccttggcaaaaccacc
gcttcttttgacttggaacaagaggtagaagtggtggccgatccatcccaccttacctta
gaagccatacaagaagcctgtaaatccctgacaggtgatatcatgcaagtaccacctacc
cactcggccatcaaaaaagacggcaaaagggtttacgagtctgcccgaaaaggcattgat
gtaaagctggatcccagaccggtcactgttttcgtttttgaaatcacgcggtgcgaactt
ccggaaatcgattttcgtatagtctgttccaaggggacatacatcaggagccttgccagg
gatttgggggaagcgcttcaggtgggtgcctacatgtctgccctgacccggacgagaatt
ggtgacagccacctatcggacgcctctgaaatcgatgagattgtagaaaaaatcaaagga
gaagcccattcatga
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