Echinicola vietnamensis: Echvi_3423
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Entry
Echvi_3423 CDS
T02388
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
Organism
evi
Echinicola vietnamensis
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
CBP_BcsS
Big_1
Motif
Other DBs
NCBI-ProteinID:
AGA79643
UniProt:
L0G2W1
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Position
4052027..4055650
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AA seq
1207 aa
AA seq
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MKIKITNGNLWTYWLQRISLFAMAILLGAAAYPAEDQQIRLPQSNVTVRQFIFSVEEQTD
YKFLYDETIAPALNGEVQLSERGQLNELLNMLNTKSQLEFRKAGQTILIRPKSKEARRAK
IDGVVFDEEGNPLAGATVKIKGATTGTITDLDGKFSLEVPGSETVLVISYVGFHSKEMAV
GNQTNLRITLQGAYQNLEGAVVTALGIRREERSLGYAVSEVSGKDFERGGQDNMLKSLAG
RVPGVSINSTGGPGSSVSMIIRGITSLSGDNQPLFVVDGVPVINSLNNISQIGNDNKVDY
GNAMSDINPEDIESVSVLKGPSAAALYGSRAGNGVVLITTKSGKNVDKVTVSVSSNTLVE
VPYKYLPMHSRFATGVRPYTPDNNPYPGGVLTIEEGSSAGAGPELDRGYEAIQWNSPRDE
NGNLIPLPLVSNPDNVANFVRNGVTTTNGVSVSNNTEKMNYRIGYTNLNNWGIVPNSDFN
RNNLSINSDLAITDKLRLSSSVNISRTGSDNRPAGNRGANPLEWAYKLSPHIDINDLKDY
WMPGQEGIQQRSQAIGDYNNPYFLAYEVNNSFDRNRVFGNIGLNYQITDEFSLQGKYMLD
MYSERRESKIPMSYTEDPNGGYGIVNLDRYERNIEVMATYQKELTDFSMTYSAGGNLRYN
RGNTMQNATKSEGSGLIVPGVYTLSNTLSDNLVYSSSISEKAVYSVYGLANLGYKDLLYL
DLTARNDWSSTLPAANRSYFYPSASLSAIISDMLPMGNQVDMIKLRAGWAQVGNDTGPYN
LLPTLSNTEEWAGQTRLSVPDGLKTPDLKPEIATSYEFGLEAAAFRNRLRFDITYFNTDN
KNQILPVTLPPSSGFTSKYVNAGLVNSKGWEMVLGLTPIDNEFVLDLNFNVSKYRSTIEE
LTDEVEVFYLWSDSRGGAWSYVGDEIGSIYDRKLVTVEDPESPYYGYPVLDEDGSWQAIN
QANAKNKVGNFNPDFIAGMQASLSYKNWSLSLTFDWRKGGDFVSQTFRYSESDLKTQRFL
DEIISPNGLSGRALRDWLVANKDTHITDGINIVGGPTAESGGFPFEYAVTLNDGVFNPGV
IPVYNDAGEITGYQENLGEEGTKIIPYADNYPWDFFKPAMFDASYIKLRDATLNYSIPTE
TAKKLNMQSINIGLYTSNLILWTKAKIGIDPENAFQPESDGTFKQGIERYNVNPWVIPIG
FRLNAKF
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaattacaaatggaaatctttggacctattggctccaacggataagtctc
ttcgccatggcaattttgcttggtgctgcggcttatccagctgaagaccaacaaatccgt
cttcctcaatctaacgttacggtacgtcaatttatttttagcgtagaagaacaaaccgat
tataaatttttatatgatgaaaccattgcgccagcacttaatggggaagttcagctcagt
gaaaggggacagctgaatgagctccttaacatgctcaatacaaagagtcaactggaattt
cggaaggcaggtcaaacaattcttatccgtcctaaatccaaagaagcaagaagggcaaag
atcgacggagtggtctttgatgaagagggcaatccactggctggagccactgtaaagatc
aagggtgctaccactggtaccatcaccgacctggatggaaaatttagcttagaagtgccg
ggaagtgaaacggtgctggtgatcagctatgtaggattccactcaaaagaaatggcagta
ggcaaccaaaccaatttacggattaccttgcaaggtgcctaccagaatttagaaggagca
gtggtcacggccttgggaatccgtcgcgaagagcgttcgctcggttatgccgtttcggaa
gtttcaggaaaggattttgaacggggcggacaggacaatatgctgaaatccctagcaggc
agggtgcctggcgtaagcatcaattccaccggagggccaggttcttcggtaagcatgatc
atccgcggcatcacctcccttagcggagataaccaaccgctatttgtggtggatggcgtt
cccgtgatcaactccctcaataatatcagccagatcggaaacgacaacaaagtggattat
ggcaatgccatgtccgatatcaacccggaggatattgagagtgtttccgtgctgaaaggc
cccagtgctgcagcactttatggttcacgtgcagggaacggtgtcgtccttatcacgacc
aagtccggtaaaaatgtggataaagttaccgtaagtgtttcttccaatactttggtagaa
gtgccctacaaatacctgccgatgcacagtcgctttgccacaggggtgcgaccttatacg
ccagataacaatccttatccgggaggagtgctcaccattgaagaaggatcttcggctggt
gcaggccctgaacttgaccgaggatacgaggccatccaatggaacagtcctcgtgatgaa
aatggtaacttgattccgttgccgttggtgtccaatcctgataatgtggcgaattttgta
cgaaatggcgtaacgaccactaacggcgtatcggtttccaataataccgaaaagatgaat
tacaggattggttataccaacttgaacaattggggaattgttcctaattctgatttcaat
cgaaacaacttgtccataaattctgatttggcgattacggataagcttcgacttagcagc
agtgtaaacattagcagaaccggttcagacaacaggcccgctggaaaccgtggggccaat
ccactggaatgggcctataagctttctccgcacattgacatcaatgatttgaaagactat
tggatgcccgggcaggagggaatccagcagcgctcccaggccataggggattacaataat
ccgtatttcctggcctatgaagtgaacaacagttttgacagaaaccgggtttttggcaat
atcggcttgaattatcagattacggatgaattttcccttcaaggcaaatacatgcttgac
atgtattccgaaaggcgggaatccaagattccgatgagctatacagaagatccaaacggt
ggatacggcattgtgaatttggatcgatatgagcgcaatattgaggtaatggccacctat
caaaaggagctcaccgattttagcatgacctactcagcaggagggaaccttcgctacaac
cgcggcaataccatgcagaatgccaccaaatccgaagggtctggattgattgtacctggg
gtttatactttgagcaatacgctttcagacaatttggtgtatagcagtagtatttccgaa
aaagctgtttacagtgtgtatggtttggcaaacttgggttataaagacctgctttacctg
gatttgaccgcccgaaatgactggtccagtacgttgccggcagctaatcgctcctatttt
tatccatccgcttccttgagtgccattatcagtgacatgttgccgatgggcaatcaagtg
gacatgatcaaattgcgggcaggttgggcacaggtaggtaacgatacgggaccatataac
ctgcttccgaccctctccaatacagaagaatgggcaggccagacccgcctgtcagtgcct
gatgggcttaagactcctgatctgaaaccagagatagctacttcctacgagtttggcctt
gaggcggcagcctttcgcaatagattgaggtttgacattacgtacttcaatacagataat
aaaaaccagattttacccgtgaccttgcctccttcctctggctttaccagtaaatacgtc
aatgccggtttggtcaacagcaaaggttgggaaatggttttggggcttaccccgatcgat
aatgagtttgtgctggacctaaacttcaatgtttccaaatacaggagtacgatagaggaa
ttgaccgatgaggtagaggtgttttacctttggagcgattccaggggaggggcgtggtct
tatgtaggcgatgagatcggcagtatttatgaccgtaaactggttacggtagaagatccg
gaatcaccgtattacggttatcccgtcctggatgaagacggcagttggcaggccattaac
caagccaatgccaaaaacaaagtcggcaattttaacccggatttcattgccgggatgcag
gccagcttaagctataagaactggagtcttagccttacttttgactggcgaaaaggaggg
gactttgtctcccaaaccttccgatactctgaatcggatttgaaaacccaacgctttttg
gacgaaatcatcagccccaatgggctaagcgggagagcacttagggattggttggtcgcc
aataaagatacccacattactgacgggatcaatatcgtcggtggtccgacagccgagagt
ggaggttttccatttgaatatgccgttacgcttaacgacggggtgttcaatccaggtgta
atccctgtttataatgatgctggagaaatcacagggtaccaggaaaaccttggtgaagag
ggtaccaagatcattccttatgccgataattacccatgggatttcttcaagccagccatg
ttcgatgcttcttacatcaagcttcgagatgcaaccctgaactatagcatccctacagaa
acggctaaaaagcttaacatgcagtccatcaatataggcctgtacaccagtaatttgatt
ctctggaccaaggcaaagatcggcattgatccagagaatgcctttcaaccagaaagcgat
ggcaccttcaagcagggaattgagcgatacaatgtaaacccttgggtgattccgattggc
tttaggttgaatgccaaattttga
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