Echinicola vietnamensis: Echvi_3509
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Entry
Echvi_3509 CDS
T02388
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
evi
Echinicola vietnamensis
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
evi03016
]
Echvi_3509
Transfer RNA biogenesis [BR:
evi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Echvi_3509
Prokaryotic type
Methyltransferases
Echvi_3509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
MMR_HSR1_Xtn
RsgA_GTPase
GTP_EFTU
Dynamin_N
ABC_ATPase
Arf
Guanylate_kin
ABC_tran
AAA_29
NOG1
DUF3974
cobW
Roc
AAA_18
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AGA79725
UniProt:
L0G4H2
LinkDB
All DBs
Position
4158855..4160237
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AA seq
460 aa
AA seq
DB search
MSFSISDKTDTIIALATPQGVGAIAVIRLSGKDAIKLTNEVFSGKNLEEQASHTIHYGTI
RDGEKIIDEVLVSLFVAPKSFTKENVVEISTHGSSYIINQVIKLLIRKGARPAKPGEFTQ
RAFLNGQFDLAQAEAVADLIHSDSEASHQAALHQMRGGFSGEIKRLRDELIHFASMIELE
LDFVEEDVEFASRDDLQRLVDKLLRVVEQLIGSFDLGNVIKNGVPTVIAGKPNAGKSTLL
NALLNEEKAIVSDIAGTTRDFIEDEINIGGVIFRFIDTAGLRETTDTIEAMGVSRTQEKM
KSASLILYLFDLSDTDMVEINRDINKLENLGVPFVKVANKIDKASDSFIAALKEKHPDTI
FISAGKKEHLDDLRDKVLELVNLDKFKTGNTVVTNIRHYDSLVKTRESLIDVLNGIDNEI
TNDFLAMDIRRSLHFLGEITGEITTDDLLANIFSKFCIGK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctccatcagtgataaaacagacacgatcatcgcattggctacaccgcaagga
gtaggggccattgccgtgatccgtttgtctggtaaggatgccatcaaacttaccaatgaa
gtgttttcaggtaaaaacctggaagaacaagccagtcataccatacattatggtaccatc
agagatggggaaaaaatcattgatgaagtcttggtttcgttgtttgtggcgccgaagtcc
tttaccaaggagaatgtggtggaaatttctacgcatggttcttcttatattatcaatcaa
gtgatcaagttgttgatccggaaaggagcgaggccagccaaaccgggtgaatttacccag
cgggcatttttgaatgggcaatttgaccttgcccaagcagaggctgtggcagacttgatc
cattcggacagtgaggcctcccatcaagcggcccttcaccaaatgcggggtggctttagt
ggagagatcaaacggctaagggatgagttgattcattttgcttccatgattgaattggag
ttggattttgtggaagaggatgtggagtttgccagtcgcgacgacctgcagcggttggta
gacaagctcttgagggtagtagagcaattgattggtagttttgacctcggcaatgtgatt
aaaaatggcgtgccgacagtgatagccggtaagccgaatgctggaaaatctacgttgctc
aacgcactcctcaatgaagaaaaggctattgtttcggatattgccggaaccacccgtgat
tttatcgaggatgaaatcaatatcggtggtgtcattttccggtttatcgatacggcggga
ctgcgggagaccacagatacgatagaagccatgggagtctctaggacgcaagagaagatg
aagtctgcttctttgatcctgtacctgtttgacctcagcgataccgacatggtagaaatc
aatcgggacatcaataagttggaaaacctaggggtcccctttgtgaaagtagctaataag
atcgataaggcaagtgacagctttattgctgcactcaaagaaaagcatccggataccatt
tttatttctgcaggcaagaaagagcatttggatgacctgagggataaggtcctggagctg
gtcaacttggataaatttaagactggtaacacggtggttaccaatattcgtcactacgat
tcgttggtaaaaacgcgagaatcactcatcgatgtgctgaacggcatcgacaatgagatc
acaaacgattttttggcgatggacatccggcgatccttacactttcttggagagatcacc
ggcgagatcactaccgatgatttactggctaatatttttagcaagttctgtatcggcaaa
taa
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