Echinicola vietnamensis: Echvi_3567
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Entry
Echvi_3567 CDS
T02388
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
evi
Echinicola vietnamensis
Pathway
evi00730
Thiamine metabolism
evi01100
Metabolic pathways
evi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Echvi_3567
Enzymes [BR:
evi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Echvi_3567
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AGA79783
UniProt:
L0G398
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Position
complement(4225789..4227660)
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AA seq
623 aa
AA seq
DB search
MKTLSQENIESYITTDPFPNSKKVYVSGTLHPIKVAMREIALHDTVSHLDRHETVEKNPP
VTVYDTSGPYTDPAAEIDVKKGLPRLREEWITNTGDVEQLDQLTSAYGQRRLANPALDKL
RFDLVKMPYRAKSGNNVSQMHYAKKGIITPEMEYIAIRENQRIAEQQELTKQHPGQNYGA
NTPKGMITPEFVRDEVAMGRAVIPANINHPEAEPMIIGRNFLVKINANIGNSAIGSSIEE
EVEKAVWACRWGADTIMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVNGKAEDLT
WELFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAHHKENF
LYTHFEEICEIMKAYNVTFSLGDGLRPGSIADANDPAQFAELETLGELTKIAWKHDVQTI
IEGPGHIPMHMIKENMDKQLVACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCA
MLCYVTPKEHLGLPEKKDVKDGVITYKIAAHAADLAKGHPGAQYRDDALSKARFEFRWED
QFNLSLDPDTARSFHDETLPADGAKIAHFCSMCGPNFCSMKITQDVRDYADKNGLNDQEA
IEEGMQKKAQEFSDKGGEIYLNQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgctcagtcaagaaaacattgaatcttacattaccacagatccttttcctaat
tcaaagaaagtatatgtatcgggcaccttgcatcccataaaggtggccatgcgtgaaatc
gcgctgcatgataccgtatcacacttggaccgtcatgagacggtagaaaaaaatccacct
gtaacggtttatgacaccagtggtccctatactgatccagcggcagagatagatgtaaaa
aaagggcttcccaggctccgcgaagagtggatcaccaatacgggagatgtggaacagcta
gatcaactcacttcagcatacggtcagcgaagactggccaatcccgcattggataagttg
cggtttgacctggtgaaaatgccttatcgtgccaaatcaggaaacaatgtaagccagatg
cattatgccaaaaaaggcatcatcactccagagatggaatacattgccattcgtgaaaac
caacgcatcgcagaacagcaagaactcaccaaacagcatcctggccaaaattatggtgcc
aatacgcctaaaggaatgattacaccggaatttgttcgggatgaagtggcaatgggcagg
gcagttattccggccaatatcaaccaccccgaagcagagcccatgattatcgggcgaaat
ttcttggttaagatcaatgccaatatcggaaactcggcgataggctccagtattgaagaa
gaagtagaaaaggccgtttgggcgtgccgatggggagcagatacgatcatggacctttcc
accggaaagaatattcacgaaacccgtgaatggattcttcgcaatagccccgttcccatt
gggacggtacccatttaccaagcgttggaaaaagtcaacggcaaggcagaagacctgacg
tgggaactgtttcgggacaccctgatcgagcaggcagaacaaggcgtggattatttcacc
attcatgccggagtattgctccgttacgttcccatgaccgccaaaagggtgacaggaatt
gtttccaggggaggttccattatggccaaatggtgcttggcccaccacaaagaaaatttc
ctttacacccattttgaggaaatctgtgaaattatgaaagcgtataacgtcaccttttca
ctcggggatggtttacgcccaggatccattgcggatgccaatgatccggcccaatttgca
gaacttgaaacgttgggtgaattgacgaaaattgcttggaaacatgacgtacagaccatt
atcgaaggccccggccatattccgatgcatatgatcaaagagaacatggataagcagttg
gtagcctgtggggaagcgcctttctataccttgggaccattgacgacggatattgccccc
ggttatgaccacatcacttcaggaattggtgcggcgatgatcggatggtacggttgtgcg
atgctgtgttatgttacccctaaggaacatttgggcttgccagagaaaaaggatgtcaaa
gacggcgtcatcacctataaaatcgctgcccatgcagcagatttggcaaagggacaccct
ggagcccaataccgtgatgatgccctcagcaaggcccgttttgaattccgctgggaagac
cagtttaacctttccctagacccggacaccgcaaggtcattccatgatgagacacttcct
gcagatggtgccaaaatagcccatttctgtagcatgtgtggccccaatttctgcagtatg
aaaatcacccaagatgtaagggattatgctgacaagaatggactgaatgatcaagaagcc
atcgaagaagggatgcaaaagaaagcacaggagttctccgataaaggtggtgaaatctat
ctaaatcaataa
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