Echinicola vietnamensis: Echvi_4228
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Entry
Echvi_4228 CDS
T02388
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
evi
Echinicola vietnamensis
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
evi02000
]
Echvi_4228
Transporters [BR:
evi02000
]
Other transporters
Pores ion channels [TC:
1
]
Echvi_4228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
Big_1
CooC_C
Invasin_D3
TTR_TEN1-4
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
AGA80424
UniProt:
L0G2G8
LinkDB
All DBs
Position
complement(5068169..5071276)
Genome browser
AA seq
1035 aa
AA seq
DB search
MKIPLKRINHLVLTWSLAGFTCLPAFALTESFPDWRAASEELTPYQDTVPQQPRPTLDVQ
DTVPPSTRTVKGKVTDQEGASLPGATVQIKGTDTGTITDEQGNYTIRLSGGSSEQVLVFS
FVGFQGKEVAVGNQSQVDVTLGSEEKELEEVVVIGYGSARKADLTGAISQVSTEEVNAFP
TTSVVQALAGRAPGVQVVQNDGSPGGGVDIRIRGSNSIQGDNSPLYVIDGFPYSGNPTNL
NNSDIASIEVLKDASATAIYGSRGANGVVLITTKGGVQAPTQVEFDSYYSVQHLRKKLDL
MNGRQYGQLMNIQAANDGLDPYFSESELSAMDTGTDWQDQVFDRAPIKSSSIRVSGGNES
TRFSVGGSIFDQEGIIRGSDYNRYALQSSIHHSLSDKLTIDFSTNLTKLTTARRDSDGGA
RGNSMIGAALVASPLSSPYAPDGSLTVLSEDFPFVSPDIINPLNYINEEFNTVNANIVLA
NASVSYRPIPKLTIKILGGIENRDDRTDVYRTTDFINSDGNASVNTRQYISRLNENTISY
ADTLDEKHKFDVLAGFTYQDFQTRYLAGSSAGFLSDLFGTDNLGAANTPGVPTSGYAKSV
LLSYIGRLNYNYADKYLFTATWRADGSSRYSEGNKWGHFPSAALAWRVSQEGFMQQQQVV
SELKIRTSWGLTGSQAIDPYSTLNRLFPGYTVFGEELYSTFAPQSVLPGDLKWETTEQFD
VGLDLGLIGGRIMLGADYYIKNTRDLLSTVRLPSSFGYTTTVANVGEIQNKGLELSMDAI
VLNRGFHWNLSGNIAFNRNRVISLNDGEPILTNYINVVTVADNFSIMEEGRPLGQFWGYQ
EDGYTEDGNIRYRDLNGDGEINESDKTAIGDPNPDFYYGINSTMTFKNFQLDLFLQGTKG
NDIFNVSAISSTMDFGQGLNMPEEVLLDHWTAENTDAKYPRISRNNDLKVSDRYVEDGSY
LRVKNIQLAYDFAFPESKWIGNLKLYVSGQNLLTFTDYSWWDPEVNSNGADASLGIDHFS
YPIPKSYTVGLRATF
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccgttaaagcgtatcaaccatctggtattgacatggagcttggcaggtttt
acttgcctgcctgcttttgcccttaccgagagctttccggattggcgagcggcctccgaa
gaactcaccccgtatcaggataccgtaccacagcaaccccgtcccacattggacgtgcaa
gacactgttccaccttccacaaggaccgtaaagggcaaggtgaccgatcaggaaggagcc
tccttgccaggagcaaccgtccaaataaaaggaaccgatacgggaacgatcaccgatgag
caggggaattataccattaggctttctggagggagcagtgaacaggtgctggtgttttct
tttgtgggcttccaaggaaaggaagtagccgtgggcaaccaaagccaagtagacgttacc
cttggttccgaagagaaggaattggaggaagtggtggtgatcgggtacggttcggcacgg
aaggcggatcttactggagccatttcccaagtcagcaccgaggaggtaaatgcctttccc
accaccagcgtggtgcaggcgttggctggccgtgctccgggcgtgcaggtggtgcaaaat
gacggttctccgggaggaggagtggacatacgcatccgtgggagcaattccatccaaggg
gacaacagccccctttacgtgatcgatggatttccctattcgggcaacccgaccaacctc
aacaattcggacattgccagcatcgaagtgctcaaggacgcttctgccacggccatatac
ggttccaggggggcaaacggagtggtgctcatcaccaccaaaggaggggtgcaggctccc
acccaagtggaatttgacagctattacagtgtgcagcacttacggaaaaagctggacctg
atgaacgggcggcagtatggccagctgatgaacatccaggccgcaaatgatggtttggat
ccctatttcagcgaaagtgagctttcggccatggacacagggacggactggcaggaccaa
gtgttcgacagggcacccatcaaatccagctccatcagggtttcggggggaaatgaaagt
acccgattttcggtaggaggaagtatttttgaccaggaagggatcattcgcggaagtgac
tataaccgttatgccctgcaatcctccatccatcattccctgagcgataagctgaccatt
gacttttcgaccaacttgaccaaactgaccactgccagaagggacagcgatggcggggct
cggggaaactccatgatcggggcagccttggtggcctctcccttgtcctcgccctatgct
cccgacggctccttgacggtattgtccgaagacttccccttcgtttccccggatatcatc
aatccgcttaactatatcaatgaggagttcaacaccgttaatgccaatattgtcctggcc
aatgcctcggtgagttatcggcccattccaaaattgaccatcaaaatccttggcgggatc
gaaaacagggatgaccgaacggatgtttaccggaccaccgattttatcaacagcgatggc
aatgccagcgtcaacacccggcagtacatcagccggctcaatgaaaacaccatttcctat
gcggacaccttggatgaaaagcataagtttgatgtcctggcgggctttacctatcaggat
tttcagacacgctacctggcaggaagttcagctggatttctcagcgacctgtttggaacg
gataacttgggcgcggccaatacccccggcgtgcccacttcgggatatgccaagtcggta
ctgctttcctatatcggtcggttgaactataattatgctgacaagtacctgtttacggcc
acttggcgtgccgatggttcctcgcgctacagcgaaggtaacaaatgggggcattttccc
tccgcagcactggcttggcgggtgtcccaagaaggatttatgcagcaacagcaggtggtg
tccgagctgaagatacgtacaagttgggggcttaccggaagtcaggccattgatccgtac
agtaccttgaacaggctttttccgggctataccgtttttggcgaggagctgtacagcacc
tttgcgccacagtcggtcctgccgggagaccttaaatgggaaaccaccgagcagtttgac
gttgggctggaccttgggctgatcggtggccgcatcatgctgggggcggactattacatc
aaaaacacccgcgacctgctcagcacggtcaggctgcccagctcctttggctataccacc
accgtggccaatgtaggcgaaattcagaacaagggccttgagctcagcatggatgccata
gtgctgaacagggggttccactggaacttgagcgggaacatcgcctttaaccgaaacagg
gtcatcagcctgaacgatggcgaacccattctgaccaactatattaatgtagtgaccgtg
gcggataacttttccatcatggaagagggaaggcccctggggcagttttggggctatcaa
gaggacggctataccgaagatggtaatatccgctacagggacctgaacggggacggggag
attaacgagtcggacaagaccgccattggcgatcccaatcccgatttttattatggcatc
aattccacgatgaccttcaagaactttcagttggacctgttcctgcaggggaccaagggc
aacgatatctttaatgtcagtgccatatccagcaccatggatttcgggcaggggttgaac
atgccggaagaagtgctgctggatcattggaccgcagagaataccgatgccaaatacccg
aggatcagccgaaacaatgacctgaaggtgtccgaccgctatgtggaggacggctcttac
ctgcgggtgaaaaatatccaactggcctatgattttgccttcccggaatccaagtggatc
ggtaacctgaaactttatgtcagtggccaaaacctgcttacgtttaccgattattcctgg
tgggatcccgaggtaaacagcaacggtgccgatgccagtctcgggatcgaccacttcagc
tatcctattccaaaatcctataccgtgggcctcagggccaccttctaa
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