Echinicola vietnamensis: Echvi_4317
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Entry
Echvi_4317 CDS
T02388
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
evi
Echinicola vietnamensis
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
evi02000
]
Echvi_4317
Transporters [BR:
evi02000
]
Other transporters
Pores ion channels [TC:
1
]
Echvi_4317
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AGA80505
UniProt:
L0G6P6
LinkDB
All DBs
Position
complement(5156041..5159124)
Genome browser
AA seq
1027 aa
AA seq
DB search
MGHFNRYVKAKSWFSALVILLNMVWSFSLFAQGKNVTGVVKDGESGDPLVGVSVLVKGTS
KGVVTDLDGAYSIQDVSTEDVLMFSYLGYSMKEIPIGSRSVIDVELVSNTSDLDEVVIVG
YGVQEKRNLTGAIASVGSEEVRKTNVQDPISLLQGRAAGVQVTSNSGAPGGGMTINIRGN
SSLNAGNNPLYVVDGVPIETNVTSSLNGSENFGLNPLAAINPADIESIEILKDASSTAIY
GSRAANGVVLITTKRGKDGKAQINLNVHSGVSQITRKLDVLNASQYRSAVLDSYANSDDG
REPIFAVVDSLSSTNNGDVDWQRELLRKAVQTSVDLSVQGGSENVRYAWSSSFLDQDGIV
LNSNYRRITSRLNVDFNVTDRLTVGQSISYSNGVNNRINAAGTGNLSIIRELLIRPPSYS
MYLPDGSLNGYQFGKRNPVGLAELSTNLNKSNRIIAGQYLEYKLAEGLKFRTSVNVDFLS
MKEDTFIPSTLDYREGYNTGSVRSTNNLTWSNENILTYQKQVDGKHNLGGLLGFSYQDWD
YERTGLDGMFFPSDDIRTLNGAGTISNQEVNIATSHSLLSYFGRVSYDYERRYLFEANLR
ADGSSRFGRDNRFGFFPSASVGWRFSDEPFLNGAGVLDDGKLRFSAGQTGNEAIGNYTSQ
GEFMVGANYLDYSGAAPTVMPNSGLSWETTTQYNAGMDLAFWQGRLGLTVDAYIKDTKDL
LYNVPIPRETGFGYITQNIGKIRNKGIEVLLNTHNVATRHFTWSTSLNISKNTNIVKELP
EELLTNGFIQNGNFHILQEGYPIGTFYGWRFDGVYARDEDNINGVTNGSQGPVFEGGDPI
WHDLNGDNVIDQNDRQVIGNATPDFFGGITNDLSYKNFSLSFMFQFSYGGEIYSEINHQR
NSIVRYNNLSTAALDRWREQGDITDFPKPVQDDPLQSDSRIQSRWVEDGSYIKLKNVNLR
YSLPLELVNRIGLSRLDAYVTGTNLVTWTNYTGFDPDVSSYSGLRIGVDEGSYPQSRTVI
VGLSIGL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggggcattttaacaggtatgtaaaggccaaatcatggttttcagcattggtgattcta
ttaaatatggtttggtcttttagtttgtttgcgcaagggaaaaacgtgacaggagtcgta
aaggacggagaaagtggagatcctctggtcggggtgtccgttttggtaaaaggaacttcc
aaaggggtggtaaccgatttggacggggcctattccattcaggatgtctctaccgaagat
gtgttgatgttctcttatttgggatattccatgaaggaaatccccatcggcagtcggtcc
gtaattgatgtggagcttgtctcgaacacaagtgatctggacgaggtggtcatcgtcggg
tatggtgtccaggaaaaaaggaacttgacaggggccattgcctcggtaggaagcgaagag
gttcgcaaaacaaacgtgcaggatcccatatcgcttttacagggaagggcggccggagtc
caggtgacctccaattcaggggcacctgggggaggaatgaccatcaatattcgcggtaac
tcctcgctgaatgcaggaaataatcccctgtatgtagttgatggtgttccgatcgaaacg
aacgtgacctcgtcattgaacggatccgaaaattttggcctcaatccattggcggccatt
aatccagcggatatcgagtcaattgaaatattgaaggatgcttcctcaacggccatatac
ggttccagggcggccaatggggtcgtgttgatcaccacaaaaaggggaaaggatggaaag
gcacaaattaacttgaacgtacattcaggggtaagccagatcaccagaaagctggacgtg
ctcaatgcgagccaatacagaagtgccgtgctggattcctacgccaattccgatgatgga
cgggaacctatttttgctgttgtcgattccttgagctctaccaataatggagatgtggat
tggcagcgtgaactgctcagaaaagccgtccagaccagtgtggacctgtccgtgcaggga
ggatccgaaaatgtaaggtatgcttggagttcctcgtttttggaccaagacggtatcgtc
ctcaattcgaactaccgcaggatcacttcccggctcaacgtggacttcaatgtgaccgat
cgccttacggtagggcaaagtatatcctattcaaatggcgtgaacaacaggatcaatgcg
gcgggcaccggaaaccttagcatcatcagggaattgctgatccgccctccgtcatattcg
atgtacctgcccgatggttccctcaacgggtaccagtttggcaaacggaacccagtgggg
cttgcagagctttctacaaatctcaacaagagcaaccgcatcattgccggccaatacctc
gaatacaaattggccgaaggcctgaagttcaggacctccgtcaacgtggacttcctttcc
atgaaagaggataccttcattccctcgaccctggattatagggaggggtacaatacgggc
tcggtccgttccaccaataacctgacctggtccaatgaaaatatactgacctatcaaaag
caagtcgatggaaagcacaatctgggtggtcttttgggcttcagttaccaggactgggac
tatgagcgcacaggattggacgggatgttttttccaagtgatgatatccggaccctgaac
ggggccgggaccatttcaaaccaagaggtgaacatagccacatcacattccctgctttcc
tactttggaagggtgtcctacgattatgaacggaggtaccttttcgaagccaatctgagg
gcagatggttcctccaggtttggaagggacaatcgttttgggttctttccttcggcgtct
gtgggatggaggttttccgatgaaccgtttttgaacggtgcgggagtgcttgatgatggc
aaattgcgctttagcgcgggccagacaggtaacgaggcgattgggaactacacctcgcaa
ggagagtttatggtgggggccaactacctggattattccggggccgcgcctacagtgatg
cccaattcgggattgtcatgggaaaccactacccagtataatgcgggaatggacctggcc
ttttggcagggaaggcttggcctgaccgtagatgcatacatcaaggacaccaaggacctg
ctctataatgtgcccattccaagggaaacgggctttgggtacatcacccaaaatatcgga
aagatccggaacaagggaatcgaagtgctgctcaatacacacaatgttgccacccggcat
ttcacctggagtacaagtctcaacatcagtaaaaacaccaacatcgtcaaggaattgccc
gaggagctgttgaccaatggttttatccaaaacggaaatttccatatccttcaggaagga
tatccgatcggtacgttttacgggtggcgatttgatggggtttatgccagggatgaagac
aatatcaatggtgtcaccaatggatcccagggacccgtattcgaaggaggggatcccatc
tggcatgacctcaacggggataatgtgatcgatcaaaatgacagacaggtcatcggcaat
gccacaccggattttttcggtgggatcaccaatgacctttcctataaaaacttcagcctg
agctttatgtttcaattttcctatggaggggagatctacagcgagatcaaccaccagcgt
aattccattgtacgatacaacaacctgtccaccgctgcacttgaccggtggagggaacaa
ggggacattaccgattttccaaaacctgtacaggacgatccgctgcagagtgacagcagg
atacagagcagatgggtagaggatggctcttacattaaattgaagaacgtgaacctgcgc
tactccttgccgctggaattggtcaaccgtattggactgtcccggttggatgcctatgtg
acgggcaccaacctggtcacatggaccaactataccggttttgatcctgatgtcagttcg
tacagcggactgagaataggagtggacgagggatcatatccccaaagtagaacggtgatc
gtaggcctatcaattggactgtaa
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