Echinicola vietnamensis: Echvi_4445
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Entry
Echvi_4445 CDS
T02388
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
evi
Echinicola vietnamensis
Pathway
evi03420
Nucleotide excision repair
evi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Echvi_4445
03430 Mismatch repair
Echvi_4445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
evi03400
]
Echvi_4445
Enzymes [BR:
evi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Echvi_4445
DNA repair and recombination proteins [BR:
evi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Echvi_4445
MMR (mismatch excision repair)
Other MMR factors
Echvi_4445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_11
AAA_30
Ku_PK_bind
Motif
Other DBs
NCBI-ProteinID:
AGA80627
UniProt:
L0G513
LinkDB
All DBs
Position
complement(5317528..5319273)
Genome browser
AA seq
581 aa
AA seq
DB search
MNSPAEKASEETLKKIYLALDNGNSFRVEAGAGAGKTYSLIKALHYLIEHKSAELQKGFQ
RIACITYTNVATEEIRNRIDNHPSVFVDTIHGFCWSILQGFQAQMRAQIELIGDEKLIEK
IEDAGGLRKQKIVYDLGYRSATEKEIFIHHDNVIQLFTALLSKEKFRSILKNQYPIIFID
EYQDTNEELGKAIISNLIESKSDMQIGLFGDHWQKIYENGIGGMVSVDIEEIGKKANFRS
EKNLVKFLNRMRPGLPQMEKDPSSAGEVKIFHSNNWIGVRRDGKGGGHWTGDLPEAEAGN
YFRAVKNKLIQEGWEFSFEKTKILMLTNSVLAREQGYSGITKVFRFSDDYLKMQNKYIDY
FVNILEPVSESFSKKKYGEMLKAIGIRTPRLKNHSDKKVWNDSLSKLIKNRNSGTIGDVI
DCLAETQKPRLSSKIEESEEKYSKLKDLTEFEDEADKKLVSKIKKLKSVKYSEVIELAKY
IDDKTPFSTNHGVKGAEFENVLVICGRGWNKYNWNQFLTWANDGVPDDKKESFERNRNLF
YVSCSRPKKRLAVLFTQELSSSAMATLNKWFLPENIFPIII
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtccagctgaaaaagcatcagaagagacattaaagaaaatctaccttgcgtta
gataatggaaattcatttcgtgttgaagcaggtgcaggtgcgggtaaaacttactcttta
ataaaagctttacattatttgatagaacataagtcagcagagcttcaaaaaggatttcag
agaattgcttgtataacatacacgaatgtcgctactgaagagattagaaatcgaattgat
aaccacccatcggtttttgttgatactatacatgggttttgttggtcaatattacaaggg
tttcaggctcaaatgagggctcagattgaattaataggtgacgaaaaacttatagaaaaa
atagaggacgcgggagggctaagaaaacaaaaaattgtatatgatttaggatatcgtagt
gcaacagaaaaggaaatctttattcatcatgacaatgtgattcagttattcactgcatta
ctttccaaagaaaaattcagaagtattcttaaaaatcaatatccaattatttttattgat
gaataccaagacacaaatgaagagttaggaaaagcaataatatcaaatttgattgaatca
aagtctgatatgcaaataggattatttggagaccattggcagaaaatttatgaaaatggt
attggtggaatggtatccgttgatattgaggaaataggtaaaaaggcaaactttaggtct
gaaaagaatttagttaaatttctaaataggatgcgcccaggactccctcaaatggaaaaa
gacccatcttctgctggagaagttaaaatctttcattcaaataattggattggtgtgagg
agagatggtaaaggaggtggacattggacaggagatttgccagaggctgaagcaggtaat
tattttagagcagtaaaaaataagttgatacaggaaggttgggagttttcatttgaaaaa
actaaaattctaatgcttactaattctgttctcgctagagaacaaggttatagcggaata
actaaagtatttaggttttcagatgattatctaaaaatgcaaaataaatacattgattat
tttgtaaatatactagaaccagtttcagagtcattcagcaaaaagaaatatggtgaaatg
ttaaaagcgattggcataagaacaccaagattgaaaaaccatagtgataagaaagtttgg
aatgatagtttaagcaaattaattaaaaatcgaaattctggaactataggtgatgtaata
gattgtttagccgaaactcaaaagcctcgtttgtcatcgaaaattgaagaatctgaagag
aaatattctaaactcaaagatttaaccgaatttgaggatgaagcagacaaaaaacttgtt
tcaaaaattaaaaaacttaaatctgtaaaatattcagaggtcattgaactagctaagtat
attgatgataaaaccccattttcaacaaatcatggcgtaaaaggagcggaatttgaaaat
gtattggtcatatgtggtagaggatggaataaatacaattggaaccagtttcttacctgg
gcaaacgatggagttcctgatgataagaaagaatcttttgaacgtaatcgtaaccttttt
tatgtttcttgttccagacctaagaaaagattagcagttttatttacacaagaattgtct
agttcagctatggcaacattaaacaagtggtttttaccagagaatattttcccaataata
atatag
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