Eubacterium ventriosum: NQ558_00060
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Entry
NQ558_00060 CDS
T08741
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
evn
Eubacterium ventriosum
Pathway
evn03420
Nucleotide excision repair
evn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
evn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ558_00060 (pcrA)
03430 Mismatch repair
NQ558_00060 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
evn03400
]
NQ558_00060 (pcrA)
Enzymes [BR:
evn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQ558_00060 (pcrA)
DNA repair and recombination proteins [BR:
evn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ558_00060 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NQ558_00060 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
GMT-wHTH
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UWP36011
LinkDB
All DBs
Position
complement(11410..13743)
Genome browser
AA seq
777 aa
AA seq
DB search
MNNIYETLNDMQQLAVYHTEGPLLILAGAGSGKTRVLTHRIAYLIEEKHVQPYNIMAITF
TNKAAGEMRERVNKIVGFGAEQVWVSTFHSACVRILRRYIDRIGYSNDFTIYDTEDQKKL
LKDVIKNLNLDPKMYKENAVLGKISDFKNKLVTTGEVAQMAQSDFKLLNLSKIYNNYQEA
LKKNNALDFDDLIMKTVHLFRKCPEVLESYQERLKYIMVDEYQDTNGAQFAFIKLLASKY
QNLCVVGDDDQSIYKFRGADISNILQFEKNFNNARVVKLEQNYRSTKTILDAANEVIHNN
KGRKDKTLWSDNEQGEKIDLYQAEDAYAEADMVASTIKENVDFGRADYSDYAILYRTNAQ
SRALEEKLLLRNIPYKIIGGQNFYQRKEIKDVLAYLRIICNATDDIAVERIINVPKRGIG
ATTVTKAKDFARAYGFNLYESLLEVENIPGLERAATKVRKFTDLIENFKDQQQSMSLKEL
VNEVLNETGYVAELAAENTDEANGRIENIDELITKVTEYEENTDNPSLAEFLEEVALVSE
IDNLDEDSSYVVLMTVHSAKGLEFPNVFLCGMEDGLFPGYMSIMSDDPEELEEERRLCYV
AITRAMKHLTISYAKRRMVRGETQYNIISRFVKEIPMSLVNSKNVTDRVAAGFEKKPSFS
GFGGYEGSLNHGGSGYMGSSYGGSRNFAANEHKNAYRAMAKKPAYGNPSTKPGFGKQFVV
TKADIDYGVGDRVHHIKFGDGTVLGVEDGPRDYQVTVEFDTAGQKVMMASFAKLKKL
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatatacgaaacattaaatgatatgcagcagttggcagtttatcatacggaa
ggaccattgcttatattggcaggtgcagggtccggaaagaccagggtgctgactcataga
attgcatatttaatagaagaaaaacacgttcagccatacaatattatggcgataactttt
acaaacaaagcggcaggtgaaatgcgtgagcgtgtaaataagattgttggttttggcgcg
gaacaggtttgggtaagtacttttcactcagcctgcgtaagaattttaagacgatatatt
gacagaataggatatagtaacgattttactatttacgatacagaagaccagaagaaactt
ttaaaggacgtaatcaagaatcttaatcttgatccaaagatgtataaggagaatgcagtt
cttgggaaaatatctgatttcaaaaacaagcttgtaacaacaggcgaggttgcccagatg
gcacagtcagattttaaattgcttaatctttcaaaaatttacaataattatcaggaagct
ttgaagaagaataacgcgttggattttgatgaccttataatgaaaacagttcatttgttc
agaaaatgtcctgaagttttggaaagttatcaggaaagattaaagtacattatggttgac
gagtatcaggatactaacggagctcagtttgcttttattaaactgttggcttctaaatat
cagaacctttgcgtagtaggtgatgatgaccagtcaatttacaaatttagaggtgcggat
atttccaatattcttcagtttgagaaaaactttaacaatgcaagggtagttaagctggag
cagaattaccgttcaacaaagactattcttgatgcggcaaatgaagttattcacaacaat
aaaggtagaaaagacaagacactttggagtgacaatgaacagggtgaaaaaatagatttg
tatcaggctgaagacgcttacgcagaggcagatatggtagcctcaacaattaaggaaaat
gtggattttggaagggcagattatagtgattacgcgattttgtacagaacaaatgcccaa
tccagagcattggaagaaaaattattgcttagaaatattccttacaaaatcattggcgga
cagaacttctatcagagaaaagaaatcaaagacgttttggcataccttagaattatctgc
aatgcaacagatgacatagctgtagaaagaattataaacgtgccaaagagaggcattggt
gcgactacagttactaaggctaaggattttgcaagagcttacggttttaatttgtatgag
tcattgcttgaagttgaaaacattccggggcttgaaagagcagcaacaaaggtaagaaaa
ttcactgatttaattgagaatttcaaagaccagcaacagagtatgtctttgaaagagtta
gttaacgaagtgttaaacgagacaggatatgtggcagaacttgcagcagaaaacacagat
gaagccaatggcagaatcgaaaatatcgatgaattaataacaaaagtaactgaatacgag
gagaatacagacaatccaagtcttgcagaatttttggaagaagttgctttggtttcagaa
attgataacttagatgaagacagcagttatgttgttttaatgacagttcacagtgcaaag
ggacttgaatttcctaatgtttttctttgcggaatggaagacggattattcccgggatac
atgagcattatgtcagatgatccggaagaactggaagaggaaagaagactctgctatgtt
gcaataacaagagcaatgaagcatctaacaataagctacgcaaagcgtagaatggtaaga
ggggagactcagtacaatattatttcaagatttgtaaaagagattccaatgagccttgta
aacagcaaaaatgtaacggatagagttgcagcaggttttgagaagaaaccatcttttagt
ggtttcggtggctatgaaggctccttaaatcatggtggctcaggctatatgggttcatct
tacggcggttcaagaaattttgctgcaaatgaacacaaaaacgcttatagagcaatggca
aagaagcctgcatatggcaatccgtcaactaagccgggctttggaaagcagtttgttgta
acaaaggcagacattgattatggcgttggtgacagagttcatcatataaaatttggcgac
ggaacagtgcttggcgtggaggacggaccaagagattatcaggtaacagttgagtttgac
acagcaggtcaaaaagttatgatggcatcttttgcaaaacttaaaaaattgtag
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