Eubacterium ventriosum: NQ558_09310
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Entry
NQ558_09310 CDS
T08741
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
evn
Eubacterium ventriosum
Pathway
evn03410
Base excision repair
evn03430
Mismatch repair
evn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
evn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQ558_09310 (recJ)
03430 Mismatch repair
NQ558_09310 (recJ)
03440 Homologous recombination
NQ558_09310 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
evn03400
]
NQ558_09310 (recJ)
DNA repair and recombination proteins [BR:
evn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NQ558_09310 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NQ558_09310 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NQ558_09310 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF1638
VP4_helical
DUF34_NIF3
Motif
Other DBs
NCBI-ProteinID:
UWP35312
LinkDB
All DBs
Position
complement(2080258..2082012)
Genome browser
AA seq
584 aa
AA seq
DB search
MKERWYLQTKKADFNEISRKFNISPILARLLRNRNVIGDENIKKYLSPDIERLSSPWMFK
DMDKAVDILKIKIAAGNRIRVICDYDVDGVCSGYILYRSLKKLGAVVDVVVPHRIEDGYG
INENLIKKAFDQGIDTILTCDNGIAAYDQVEYAKSLGMTIIVTDHHEVPYTETEQGREYI
IPKADAVINHKQKDCGYPFKELCGAMVAFQLISALTESYGISKRDVYRLLPYAALATICD
VVELQGENRMVVQYGLKMIKNCKDVGLNALIDACKIDKNNIDSYHIGFVLGPCINASGRL
DTAKKAMELLSETNREKADILATSLKELNDERKAMTEEGTKKAIEIAKDYDDNVLVIYLK
DCHESIAGIIAGRVRERCNKPVIVLTDAKDCVKGSGRSIEEYDMYEELCKVKDLFLKFGG
HKMAAGVSLPKENIELLRKRLNENSTLTEDDLCLKVWIDMQLPIEYISMNLVEELKTLAP
FGKGNEKPIFADKNLKIKKLQILGKAGNVLKLTIENSTNYRMTAIMFDRTQEFMGFIKEK
FGQEEINKALLGQNNAITFMATFYPTINEFRGNIDLQIVIDRFC
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaagatggtatctgcaaactaaaaaagcagatttcaatgaaataagcagaaaa
tttaacattagtcccattctggcaagattacttagaaacaggaatgttataggtgatgaa
aatattaaaaaatatctttctcccgacattgaaagactaagttcaccatggatgtttaaa
gatatggataaagcagttgatattttaaaaatcaaaattgctgccggaaacagaataaga
gttatttgtgattatgatgtggatggtgtctgctcagggtatattttgtatagatcactt
aaaaagcttggagcagtagttgatgttgttgtacctcacagaatagaagatggctatggt
attaacgagaatcttataaaaaaagctttcgaccagggaatagatacaattttgacctgt
gacaacggaattgccgcatacgatcaggttgaatatgctaaaagccttggaatgacaata
attgtaacagaccatcacgaagttccatatacggaaacagaacaggggcgagaatatatt
attccaaaagctgatgcagtaattaatcacaaacagaaagattgtggatacccttttaag
gaattgtgtggggcaatggttgcctttcaactaatttcagcactgacagagtcctatggc
atatcaaaaagagacgtttaccggttacttccatatgctgctttggcaactatatgtgac
gtagttgaacttcagggcgaaaacagaatggttgttcaatatgggcttaaaatgataaag
aactgcaaagatgttggcttaaatgcattaatagatgcctgcaaaatagacaagaacaac
attgactcataccatatagggtttgttttgggaccgtgcataaatgccagtggacgactt
gatacagctaagaaagccatggaacttttaagtgaaacgaatagggaaaaagctgatatt
cttgccacgtcattaaaagaattaaatgacgaaagaaaagctatgactgaagaaggaaca
aaaaaagcaattgaaatagcaaaagactatgatgataatgttttggtaatatatttaaaa
gattgtcacgaaagtatagccggaattattgcaggaagagttagagaaaggtgtaataag
ccggtaatagttctgacggatgccaaagattgtgtgaaaggctcaggaagatctattgag
gaatatgatatgtatgaagaactttgcaaggttaaggatttgtttcttaagtttggtggc
cacaaaatggctgcaggtgtgtctcttccaaaagaaaacatagaacttcttagaaaaaga
ttaaacgagaacagtactttgacggaagatgatttatgccttaaagtctggatagacatg
cagcttccaattgagtatatttcaatgaatcttgttgaagaattaaaaacacttgcacct
tttggaaaaggaaacgagaagcctatttttgcagacaaaaacttaaaaattaaaaaactt
caaatattgggaaaagccggaaatgtgctgaaattgacaattgaaaacagtacaaattac
agaatgacggctataatgtttgacagaactcaagaatttatgggatttattaaggaaaaa
tttggacaggaagagattaataaagctttacttggtcaaaataatgcaattacatttatg
gcaaccttttatcctacaataaatgagtttagaggtaacatagatttacaaatagttatt
gatagattttgctaa
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