Eubacterium ventriosum: NQ558_11370
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Entry
NQ558_11370 CDS
T08741
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
evn
Eubacterium ventriosum
Brite
KEGG Orthology (KO) [BR:
evn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
evn03032
]
NQ558_11370 (topA)
03400 DNA repair and recombination proteins [BR:
evn03400
]
NQ558_11370 (topA)
Enzymes [BR:
evn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NQ558_11370 (topA)
DNA replication proteins [BR:
evn03032
]
Prokaryotic type
DNA Topoisomerases
NQ558_11370 (topA)
DNA repair and recombination proteins [BR:
evn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NQ558_11370 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
REase-ARP
Toprim_4
FliS
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
UWP35686
LinkDB
All DBs
Position
complement(2529442..2531520)
Genome browser
AA seq
692 aa
AA seq
DB search
MAKYLVIVESPAKVKTIKKFLGSNYEVVASNGHVRDLPKSTMGIDMENDYEPKYITIRGK
GDKLAELRRYAKKADKVYLATDPDREGEAISWHLSIALKLDPKKTYRITFNEITKQAVKE
SLKHPRDIEMGLVDAQQARRVLDRMVGYSISPLLWMKIKRGLSAGRVQSVALKMLCDRED
EINAFIPKEYWDMDAVLKHKNKEFTVSFYGDNKGKLEITGKEQLDGIVKELKDSEFTVKD
IKKGSRTRKAPIPFTTSTLQQEASKALNFSTQKTMRIAQQLYEGVDIKGRGTIGLITYLR
TDSTRVSETAEVQVKEFIESKYGDSYMAKEINSKKSNKKIQDAHEAIRPTDVNLMPEEVK
DQLPRDLFRLYQLIWRRFVASRMENSVYETTNVKVNAGKYIFNASTSKLDFDGFMKVYTD
SDNEKVVTNNTIAKLEKDSKLEFEKFEENQHFTQPPAHFTEAALVKAMEEQGIGRPSTYA
PTITTIIARRYVTREKKNLYVTELGEAVNNVMKTEFSVIVDTQFTANMESLLDAVEEGTI
EWKTVIRNFYPDLKEQVENAEKNLEKIDIADEESDEICEECGRRMVIKYGPHGKFLACPG
FPECRNTKPYLEKIGVPCPKCGKDVLLKKTKKGRRYYGCIDNPECDFMSWQKPSAEKCPQ
CGGYMVEKGNKLACADPQCGYVTELKKEKQAN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatatcttgtgattgtggaatcaccggctaaagttaagactattaaaaagttt
ttgggctctaactatgaagtagttgcttcaaatggacacgttagagatcttcctaaaagt
acaatgggaatagacatggaaaatgactacgaaccaaagtacattacaattaggggaaag
ggagacaagttggcagaacttcgtcgctatgcaaaaaaagcagacaaagtatatttggca
actgacccggaccgtgagggagaagcaatttcatggcacttatcaatagccttgaaatta
gatccaaagaagacttacagaattacttttaatgaaattacaaagcaggcagtaaaagag
tcattaaaacatccaagagatatagaaatgggattagttgatgcccagcaggcaagaaga
gtattagacagaatggtgggatatagcattagtccgctattatggatgaagattaaaaga
ggtttaagtgcaggacgagttcagtctgtagcattaaaaatgctctgtgacagagaagat
gaaataaacgcatttattccaaaagaatattgggatatggatgcagtattaaagcacaaa
aataaagaatttacagtaagcttttatggtgacaacaagggtaaattagaaattaccgga
aaagaacagttagacggaattgttaaggaattaaaagacagtgagtttactgttaaggac
attaaaaagggaagcagaacaagaaaagcacctataccttttacaacaagtacattgcag
caggaagcttcaaaggcgcttaacttctcaacacagaagacaatgagaatagctcagcag
ttgtatgagggtgttgacattaagggcagaggaacaataggtcttataacatatttgaga
actgattccacaagagtatcagaaacagcagaagttcaggtaaaggaatttatcgaaagc
aaatatggcgattcatatatggctaaagagattaactcaaagaagtcaaacaagaagatt
caggatgctcacgaagcaatcagacctacagatgtaaacttaatgcctgaagaagtaaaa
gaccagcttccaagagatttatttagattatatcagcttatctggagaagatttgttgca
agccgtatggaaaattcagtttacgaaacaactaacgtaaaagttaatgcaggaaagtat
atttttaatgcatcaacatcaaaacttgattttgacggttttatgaaagtctatacagac
agtgataatgagaaagttgttacaaacaacaccattgcaaagcttgaaaaagattcaaaa
cttgaatttgaaaagtttgaagaaaatcagcactttacacagccacctgcacattttacg
gaagcagcacttgtaaaggcaatggaagaacagggtattggacgaccaagcacttatgct
ccgactattacaacaattattgcaagacgttatgtaacaagagaaaagaaaaatctttat
gttacagagttaggtgaagcagtaaacaatgtaatgaaaacagagtttagtgttattgta
gacacacagtttacagctaacatggaatcacttcttgatgcagttgaagaaggtacaata
gaatggaagacagttatcagaaacttctatcctgacttaaaagaacaggtagaaaatgct
gaaaagaacttagaaaagattgacattgcagatgaagaatctgatgaaatctgtgaagaa
tgtggaagacgtatggtaattaaatacggcccacatggtaagtttcttgcctgtccggga
tttcctgaatgtagaaatacaaaaccatacttagaaaagattggtgttccttgtccaaag
tgtggaaaggatgtattacttaagaaaaccaagaagggcagaagatattatggttgtata
gataaccctgaatgtgattttatgtcatggcagaaaccttctgcagaaaagtgtccacag
tgtggaggctatatggttgaaaaaggtaacaagcttgcatgtgcagatccacagtgtggt
tatgttacagaacttaagaaagaaaagcaggctaactaa
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