Enterobacter hormaechei subsp. xiangfangensis: BFV63_00805
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Entry
BFV63_00805 CDS
T04821
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
exf
Enterobacter hormaechei subsp. xiangfangensis
Pathway
exf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
exf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFV63_00805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
exf03021
]
BFV63_00805
03019 Messenger RNA biogenesis [BR:
exf03019
]
BFV63_00805
Transcription machinery [BR:
exf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BFV63_00805
Messenger RNA biogenesis [BR:
exf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BFV63_00805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AOP89513
UniProt:
A0A837FI85
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All DBs
Position
164089..165348
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AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atgggactggaaaaccaggctcgtatgcgcaagcaggacatcattttcgccatcctgaag
cagcacgctaagagtggcgaagatatctttggcgacggtgtgctggagatactgcaagac
ggatttggtttcctccgctccgcagacagctcctacctcgccggccctgacgacatctac
gtatcccctagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgtcctccaaaagagggtgaacgctactttgcgctgttgaaggttaacgaagttaac
tacgacaaaccggaaaactcccgcaataagatcctgttcgagaacttaacgccgctgcac
gcgaactctcgcctgcgcatggagcgtggtaacgggtctactgaagacttaaccgcgcgt
gtgctggatctggcatcgccaattggtcgtggccagcgtggtctgattgtagcgccgcca
aaagccggtaaaaccatgctgctgcaaaacatcgcgcagagcattgcttacaaccaccca
gactgtgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggggaagtggttgcgtctaccttcgacgagcctgcttcccgccacgtt
caggttgcggaaatggttatcgagaaggcgaaacgcctggttgagcacaagaaagatgtg
atcatcctgctcgactccatcacccgtctggcgcgtgcctacaacaccgtggtgccggct
tccggtaaagtactgaccggtggtgtggatgccaacgccctgcatcgtccgaagcgtttc
ttcggtgcggcgcgtaacgtggaagagggcggtagcctgaccattatcgcgacggcgctg
atcgataccggctccaaaatggacgaagttatctacgaagagttcaaaggtacaggcaac
atggaactgcacctttctcgtaaaatcgcagaaaaacgcgtcttcccggcgatcgactac
aaccgttccggtacccgtaaagaagagctgcttaccactcaggaagagcttcagaaaatg
tggatcctgcgcaaaatcatccatccaatgggcgaaatcgacgcaatggaattcctcatc
aacaaactggcgatgaccaaaacgaacgacgatttcttcgacatgatgaaacgctcgtaa
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