Enterobacter hormaechei subsp. xiangfangensis: BFV63_03935
Help
Entry
BFV63_03935 CDS
T04821
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
exf
Enterobacter hormaechei subsp. xiangfangensis
Brite
KEGG Orthology (KO) [BR:
exf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
exf03019
]
BFV63_03935
Enzymes [BR:
exf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BFV63_03935
Messenger RNA biogenesis [BR:
exf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BFV63_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
CON_HrpB
Helicase_C
HA2_N
DUF2732
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AOP90092
LinkDB
All DBs
Position
824785..827214
Genome browser
AA seq
809 aa
AA seq
DB search
MSSLPVAVVLPELLAALEHAPQVLLSAPTGAGKSTWLPLQILRDGNISGKIILLEPRRLA
ARNVAQRLAELLNEKPGETVGYRMRAETCVGPSTRLEVVTEGILTRMLQNDPELTGVGLV
ILDEFHERSLQADLALALLLDVQQGLRDDLRLLIMSATLDNERLRQTLPDAPMISSEGRA
FPVERRYQPLPAHQRFDEAVAIATAELLRQEPGSLLLFLPGVGEIQRVQEQLASRVNSDV
MLCPLYGALPLADQRKAILPAPAGQRKVVLATNIAETSLTIEGIRLVVDSTLERVASFDP
RTGLTRLLTQRISQASMVQRAGRAGRLEPGICLHLTSAEQAERAAFQSTPEILQSDLSGL
VMDLMQWGCPDPDQLTWLNPPPVVNLSAARSLLTQLGALEGERLTARGQKMAALGNDPRL
AAMLVAAQGDDEIATAAKLAAILEEPPRGGGSDLGQAFSRHQGNWQERAQQLCKRLNCRG
GSPDSDKVIPLLAQAFPDRIARRRGLDGRYQLANGMGAMLDSDDAQTRHEWLIAPLLLQG
SHSPDARILQAVAVDIDLLTRACPQLLQQSDIVEWDDTQGTLKAFRRSQIGKLTLGTKPL
AKPSEEELHQAMLNGIREKGLSVLNWTPEAEQYRIRLHCAAKWLPEQGWPAVDDETLLAT
LEQWLLPQMSGVHSLRALKALDVKAALQNLLDWSLRQRLDSELPGHYTVPTGSRIAIRYH
EDNPPALAVRMQEMFGEATTPSIAEGRVPLVLELLSPAHRPLQITRDLGAFWAGSYREVQ
KEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctctttgcccgtcgccgtcgtccttcctgagctactcgcagccttagaacatgcg
ccacaggttttgctcagcgcgcccaccggagcgggtaaatccacctggctgcccctgcaa
attctgcgcgatgggaacatcagcgggaaaattatcctgctggagccgcgcaggctggcg
gcgcgcaatgtggcgcagcgcctggcggaactgctgaatgaaaaaccgggtgagacggta
gggtaccggatgcgcgccgaaacctgcgttggaccatccacgcggctggaagtggtcacc
gaaggtattcttacccgtatgttgcaaaacgatccggagctgaccggcgtcgggctggtg
atccttgatgaatttcacgagcgcagcctccaggccgatctggcccttgcgctgctgctc
gacgttcagcaggggctgcgcgacgaccttcggctgctgattatgtcggcgacgctggat
aacgagcggctccggcagacgctccctgacgcgccgatgatctcctctgaagggcgtgcg
ttcccggtcgagcgccgctatcagccgctgcctgcccatcagcgttttgacgaagcggtt
gccatcgccaccgccgaattgctccgccaggagcccggctcgctgctgctgtttttaccc
ggcgtaggcgaaatccagcgcgtacaggagcagctggcatcccgggtgaacagtgacgtt
atgctgtgcccgctctacggcgcgctgccgttggctgaccagcgcaaggcgatccttccc
gcaccggcggggcagcgcaaagtggtgctggcaacgaatatcgcggaaaccagtttgacc
atcgaaggcattcgcctggtggtggacagtacgctggagagggtggccagttttgatccg
cgtaccgggctgaccaggctgctgacgcagcgcatcagccaggcctcaatggtgcagcgc
gcagggcgagcagggcgtcttgagccgggtatttgcctgcatttaaccagcgccgagcag
gcggagcgtgcggcattccagagcacgcctgagattttacaaagcgatctctccggactg
gtgatggatctgatgcagtggggttgcccggaccctgaccagctcacctggcttaatcct
ccgcctgtcgtcaacctttccgccgcgcgcagtctgctgacccagcttggcgcgctggaa
ggcgagcgactgacggcgcgcggccagaaaatggcggcgctgggcaacgatccacgtctg
gcggcaatgctggtagcagcacagggcgacgatgaaattgccacggcggcaaaactggcg
gctattcttgaggagccgccgcgcggtggcggcagcgatctgggacaggccttttcacgc
catcagggaaactggcaagagcgggcgcagcagctgtgtaaacgcctgaattgccggggc
ggttcgcctgacagcgataaagttatccctctgctggcccaggccttcccggacagaatc
gcgcgccgtcgcgggctggatggtcgctatcagctggcaaatgggatgggcgcgatgctg
gacagcgatgacgcccagacgcgtcatgaatggctgatcgcgccgctcttactccagggc
agccactccccggacgcgcgtattttacaggcggttgccgtggatattgacctcctgacg
cgtgcctgcccgcagctgcttcagcaatctgacatcgtggaatgggatgatacccagggc
acgctgaaggcgttccgtcgtagccagattggcaaactgacgctcgggacgaaaccgctg
gcgaagccgtcggaggaagagttacaccaggcgatgctgaatggcattcgggaaaaaggg
ctgagcgtactgaactggacgccggaggctgaacaatatcgtatacgtctgcactgcgcc
gcgaagtggctgccggaacaggggtggccagcggtggatgatgagacgctgctcgcgacg
cttgaacagtggctgttgccgcagatgagcggcgtacactcgctgcgcgccctgaaggcg
cttgatgttaaggctgcgttacagaatttactggactggtcgttacgtcaacgtctggat
agtgaactgcctgggcattacactgtgccaaccgggagccggattgccattcgttatcat
gaggataatccgccggcgctggcggttcggatgcaggagatgtttggtgaggccaccacg
ccgtccattgctgaaggccgtgtgccgttagtgcttgagctgctttcgcctgcgcatcgt
cccttgcagatcacccgcgacttgggggcgttttgggcggggagctatcgtgaagtgcag
aaagagatgaaagggcgatatcccaaacacgtctggccggacgatccggcgaataccgcg
ccgacacggcgcacgaaaaaatattcgtaa
DBGET
integrated database retrieval system
