Enterobacter hormaechei subsp. xiangfangensis: BFV63_12140
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Entry
BFV63_12140 CDS
T04821
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
exf
Enterobacter hormaechei subsp. xiangfangensis
Brite
KEGG Orthology (KO) [BR:
exf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
exf03016
]
BFV63_12140
Enzymes [BR:
exf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BFV63_12140
Transfer RNA biogenesis [BR:
exf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BFV63_12140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AOP91611
LinkDB
All DBs
Position
2522041..2523975
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
SAVIHTEKERESAEPEALIEPFLTRFVGKVHKKDDRLSVVPDHPFLKDAIPCRAARGVEH
DFVEGDWAVAEMRRHPLKGDRGFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMQDEGLERRDLTALDFVTIDSASTEDMDDALYAEETVDGKLHLTVAIADPTAWIVEGSR
LDEMAKVRSFTNYLPGFNIPMLPRELSDDLCSLRAHEVRPVLACRMTIAADGTIEEDIEF
FAATIESKAKLAYDDVSDWLENTGNWKPESDNIAAQIRLLHRVCLSRSEWRQTHALVFKD
RPDYRFVLGEKGEVLNIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKTHDVHVDPEEVLTLQGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESVARPQDGTTLQMAERRRLNRM
AERDVGDWLYARFLNDKAGTDTRFPAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggctttcttgaagttgatggg
cagaagagctacttcattccgcctcctcagatgaagaaagtgatgcatggcgaccgtatt
tcggccgttattcataccgaaaaggaacgagagtctgccgagccggaagcactgatcgaa
cctttcctgacccgctttgtcgggaaagtgcataaaaaagacgatcgtctttccgtcgtg
ccggaccatcctttcctgaaagatgctattccgtgccgcgccgcgcgtggcgttgagcat
gattttgttgagggtgactgggcggttgctgagatgcgccgtcatcctttaaaaggcgat
cgcggtttctacgccgagcttacccaatacattaccttcggcgacgaccatttcgtccca
tggtgggtgacgctggcgcgccacaatctcgaaaaagaagcgcctgatggcgtggcgact
gaaatgcaggacgaaggtctggaacgtcgcgatctgacggcgctggactttgtcaccatt
gacagcgccagcaccgaggatatggacgatgcgctgtatgccgaagagacagtcgatggc
aaactgcatctgaccgtcgccatcgccgaccctaccgcatggattgtcgaaggcagcagg
ctggacgagatggccaaagtgcgctcgttcaccaactacctgccgggctttaacattccg
atgttgccgcgtgaactttccgacgatctttgttcgctgcgtgcgcatgaagtacgtccg
gtgctggcatgtcggatgaccattgcggctgacggtaccattgaagaagatattgaattc
ttcgccgccaccatcgaatccaaagccaagctggcctatgacgacgtgtccgactggctg
gagaacacgggcaactggaaacccgagtcggacaacattgccgcacaaattcgtctgttg
caccgcgtctgcctgagccgcagcgaatggcgtcaaactcacgcgctggtcttcaaagat
cgtccggactaccgttttgtgctgggtgaaaaaggtgaagtgctgaatatcgtcgctgag
ccgcgccgtattgccaaccgcatcgttgaagaagcgatgatttccgccaacatatgtgct
gcacgcgtgctgcgcgacaaattaggctttggcatttacaacgtgcacaccgggtttgat
ccggcgaacaccgaagcgctggctgccctgctgaaaacccatgacgtacacgtcgatcct
gaggaagtgctgaccctgcaaggtttctgcaaactgcgccgcgagctggacgcacagccg
tcagggttcctcgacagccgtattcgccgcttccagtcctttgcggaaatcagcaccgag
cctggcccgcacttcggccttggccttgaggcttatgcgacctggacctccccgatccgt
aagtacggcgacatggttaaccatcgtctgctgaaagcgatcatcaaaggggaatctgtt
gcccgcccacaggatggtacgacattgcagatggcagaacgtcgccgtctcaaccgtatg
gcggagcgtgatgtcggcgactggttgtacgcgcgcttcctgaatgataaggcagggact
gatacccgtttcccggctgaaatcattgacatcagccgcggcggtatgcgcgttcgcctg
gtggataatggcgccgttgcctttattcctgccccgttcctgcatgccgtccgcgacgaa
ctggtttgtagccaggaaaacgggaccgtgcaaattaaaggcgaaacggtttacaaggtc
actgacgtgattgatgtcaccatcgctgaagtgcgcatggaaacccgcagtattatcgcg
cgccctgtcgcctga
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