Enterobacter hormaechei subsp. xiangfangensis: BFV63_13020
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Entry
BFV63_13020 CDS
T04821
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
exf
Enterobacter hormaechei subsp. xiangfangensis
Brite
KEGG Orthology (KO) [BR:
exf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
exf03016
]
BFV63_13020
Enzymes [BR:
exf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BFV63_13020
Transfer RNA biogenesis [BR:
exf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BFV63_13020
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Sfi1
Motif
Other DBs
NCBI-ProteinID:
AOP91764
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All DBs
Position
complement(2708349..2709503)
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AA seq
384 aa
AA seq
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MGANKRESDLNYQMITTNDELASLCEVTREFPAIALDTEFVRTRTYYPQLGLIQMYDGKH
VSLIDPLGITDWAPMRDLLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFSG
RPLSWGFAAMVEEYTGLTLDKSESRTDWLARPLTARQLEYAAADVFYLLPIAGQLMKEAE
ASGWLSAALDECRMTQQRRQEVVDPKEAWRDITNAWQLRTRQLACLQLLADWRLRKARER
DLAVNFVVREEHLWAVARYMPGSLGELDSIGLSGSEIRFHGKTLLALVEKAQQLPEDALP
EPLLNLMDMPGYRKAFKDIKALVQTVAGESKLSAELLASRRQINQLLNWHWKLKPQNGLP
ELVAGWRGELMAERLNTLLEGYPR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaacaaaagagagtccgatttgaattaccagatgatcactaccaacgacgag
ctggcttcgctgtgcgaggtgacgcgtgaatttcccgctatcgccctggatacggaattt
gtccgcacccgaacgtactatccgcagctgggtctgattcagatgtatgacggcaaacac
gtgtcattgattgaccccctcggcattaccgactgggcgccaatgcgcgatctgttgctg
gataccgccgtgaccaaatatctgcacgcgggcagtgaagatctggaagtctttctcaac
acttttggcatcatgccgcagccgctgattgatacccagatcctcgcggcgttcagcggt
cgtccgctctcctggggcttcgccgcgatggtggaagagtacaccggtctgacgctggat
aagagcgaatcgcgtaccgactggctcgcgcgtcccctaacggcgcgtcagcttgaatac
gccgcggcagacgtcttttaccttcttccaattgccggccagcttatgaaagaggctgag
gcgtccggctggctgtctgccgcactggacgagtgccgcatgacgcagcagcgtcgtcag
gaagtggttgatccgaaagaggcctggcgtgacatcaccaacgcctggcagctgcgcacc
cgccagctggcctgtctgcaactgctggctgactggcgtctgcgtaaagcacgtgagcgc
gatctggcggttaacttcgtggtgcgtgaagaacacctgtgggcggtggcgcgctatatg
ccgggtagccttggcgaactggacagcattggcctttccgggagtgagatccgtttccac
ggtaaaacgctgctcgcgctggtagagaaagctcagcagctgccggaggacgcactgcca
gaaccactgcttaacctgatggatatgccgggctaccgcaaggcgttcaaagatatcaaa
gcgctggtgcagacggtggcgggggaaagcaaactgagtgccgaactgctggcttcacgt
cgtcagattaaccagctgctgaactggcactggaagttgaaaccgcaaaatggtttaccg
gagctggtcgccggatggcggggggaactgatggccgaacgcctgaataccctgctggaa
gggtatccgcgctaa
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