Enterobacter hormaechei subsp. xiangfangensis: BFV63_21960
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Entry
BFV63_21960 CDS
T04821
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
exf
Enterobacter hormaechei subsp. xiangfangensis
Pathway
exf03030
DNA replication
exf03410
Base excision repair
exf03420
Nucleotide excision repair
exf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
exf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFV63_21960
03410 Base excision repair
BFV63_21960
03420 Nucleotide excision repair
BFV63_21960
03440 Homologous recombination
BFV63_21960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
exf03032
]
BFV63_21960
03400 DNA repair and recombination proteins [BR:
exf03400
]
BFV63_21960
Enzymes [BR:
exf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFV63_21960
DNA replication proteins [BR:
exf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BFV63_21960
DNA repair and recombination proteins [BR:
exf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BFV63_21960
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFV63_21960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
AOP93432
LinkDB
All DBs
Position
complement(4599205..4601997)
Genome browser
AA seq
930 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYHPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVAKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAESDKIAGLTFRGAKTMAGKLADNK
EVAYLSYQLATIKTDVELELTCEQLEVQEPAADELLGLFRKYEFKRWTADVEAGKWLQAK
GAKPAAKPKETIVVDAEEQSEEEAVALSFDNYETILEESRLVAWIEKLKKAPVFAFDTET
DSLDNITANMVGLSFATEPGIAAYVPVAHDYLDAPEQISRERALELLKPILEDEKALKVG
QNLKYDRGILQNYGIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLKHKTITFEEIAG
KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQKHEGPLNVFRNIEMPLVPVLS
RIERNGVKIDPTVLHNHSGELAQRLTELEQKAHELAGEAFNLSSPKQLQTILFEKQGIKP
LKKTPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRVHTS
YHQAVAATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLS
RDKGLLTAFAEGKDIHRATAAEVFGLPLESVTNEQRRSAKAINFGLIYGMSAFGLSRQLN
IPRKESQKYMDLYFERYPGVLEYMERTRAQAKEKGYVETLDGRRLYLPDIKSSNAARRAG
AERAAINAPMQGTAADIIKRAMIAVDAWLEKEKPRVKMIMQVHDELVFEVHKDDLETVSQ
KIHELMENSMKLDVPLLVEVGSGENWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttatactcgtcgatggctcttcttacctgtatcgg
gcgtatcatgcgtttcctcctctgaccaacagcgcaggggaacctaccggcgcaatgtac
ggcgtgctgaatatgctgcgcagcctgattctgcaataccatccaacccatgcggccgtg
gtgtttgatgcgaagggtaaaaccttccgcgatgaattatttgagcactacaaatcacac
cgtccccctatgcctgacgatctgcgtgcgcagattgaaccgctgcacgctatggtgaaa
gcgatggggctgccactgctggcggtctctggcgttgaagctgacgacgtaattggtacc
ctggcgcgcgaagcggaaaaagcaggccgcccggttctgatcagtaccggtgataaagac
atggcgcagctggtaacgccagggattacgctgatcaacaccatgacaaacaccattctt
ggcccggaagaagtggtcgccaaatatggtgtgccgccagagctcattattgatttcctc
gccctgatgggcgattcctcggataacattcctggcgtgccgggcgtgggtgaaaaaaca
gctcaggcgctgctgcaagggctgggcgggctggatacgctgtatgcagagtccgacaaa
attgccggtcttaccttccgtggcgcaaaaaccatggccggaaagctcgccgataacaaa
gaggtggcttatctctcctatcagttggccaccatcaaaactgacgtagagctggagctt
acctgcgagcagctggaagtgcaggaacccgccgccgacgaactgcttggtctgttcaga
aaatacgaatttaaacgctggaccgcggatgttgaagccggtaaatggcttcaggcgaaa
ggggctaaacctgcggcgaagccgaaagagaccatcgttgtcgatgccgaagagcagtca
gaagaagaggcggtagcgctctccttcgacaactatgaaaccatcctggaagagtcacgg
ctcgtcgcctggattgaaaagctgaaaaaagcgccagtatttgctttcgataccgaaacg
gacagcctcgataacattacggctaatatggtgggcctgtcattcgcaacggagccgggt
attgccgcctatgttccggttgctcacgactatctggatgcgccggagcaaatctcccgc
gagcgcgccttagaactgctgaagccgattctggaagacgagaaagcgctgaaggtcggg
caaaacctgaagtacgaccgcggtattctgcaaaactacggcattgagctgcgtggtatc
gcttttgacaccatgctggaatcttacattctggacagcgtggcgggccgccatgatatg
gattccttatccgatcgttggctgaaacacaaaaccatcaccttcgaagaaattgccggt
aagggcaaaaatcagctgacctttaaccagatcgcgctggaagaagcaggccgctacgcc
gcggaagacgctgacgtcacgctacagctgcatctcaaaatgtggccgaaattgcagaag
cacgaagggccgctgaatgtgttccggaacattgagatgccgctggtgcctgtgctgtcc
cgcattgagcgcaatggcgttaaaatcgacccaacggtgctgcataaccactctggtgag
ctggcgcagcgcctgaccgagcttgaacagaaggcgcatgagcttgctggcgaggcattt
aacctgtcgtcaccgaaacagctgcaaaccatcctgtttgaaaaacagggcatcaagccg
ctgaagaaaaccccaggcggcgccccttcaacgtctgaagaggtgctggaagagctggcg
ctggactatccgctgccaaaagttattctgcaataccgcggcctggctaagctgaaatcg
acctataccgacaaactgccgttgatgatcaacccgaaaacgggccgcgtgcacacctcc
tatcaccaggctgtggcggcgaccgggcgactttcgtcaaccgatcctaaccttcagaac
attccggtgcgtaatgaagagggccgccgtattcgccaggctttcattgcgccagaggat
tatctgattgtctccgcggactactcgcaaatcgaactgcgtattatggcgcacctgtca
cgcgacaaaggcctgctgacggcctttgccgaagggaaggacattcaccgggcaaccgct
gccgaagtgtttgggctgccgctggagagcgtgacaaatgagcagcgtcgtagcgcaaaa
gcgatcaacttcggtctgatttacggcatgagtgcctttggtctttcacgccagctcaat
attccgcgtaaagagtcgcagaagtatatggatctctacttcgagcggtatccgggcgtg
ctggaatatatggaacgtacccgcgcgcaggcgaaagagaaaggctacgttgaaacgctg
gatggccgtcgtctctaccttccggacatcaaatccagcaacgccgcgcgccgcgcgggt
gctgaacgtgctgcgattaacgcccctatgcagggcactgcggcggacatcattaaacgc
gcaatgatcgccgtcgatgcctggttggaaaaagagaagccgcgcgtgaaaatgatcatg
caggtacacgatgaactggtctttgaagttcataaagacgatctggagacggtctctcag
aagatccatgaactgatggaaaacagcatgaagctggacgttccgttgctggtggaagtg
ggtagcggcgaaaactgggatcaggctcactaa
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