Exiguobacterium sp. Helios: HNY42_04600
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Entry
HNY42_04600 CDS
T10355
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
exh Exiguobacterium sp. Helios
Pathway
exh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
exh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNY42_04600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
exh03019
]
HNY42_04600
03009 Ribosome biogenesis [BR:
exh03009
]
HNY42_04600
Enzymes [BR:
exh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HNY42_04600
Messenger RNA biogenesis [BR:
exh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HNY42_04600
Ribosome biogenesis [BR:
exh03009
]
Prokaryotic type
rRNA helicases
HNY42_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QNR20254
LinkDB
All DBs
Position
892222..893820
Genome browser
AA seq
532 aa
AA seq
DB search
MTTFRELNLSEALIKGVLKMGFEEATPIQAETIPVGLSGVDLIGQAQTGTGKTAAFGIPT
IERLDAKSRHIQALILAPTRELAIQVAEELNRIGEVKRVHALPVYGGQQIDRQIRALRKN
PQIVVATPGRLMDHMNRKTLNLDHVQTVILDEADEMLNMGFVEDIEKILGTLPPTRQTLL
FSATMPPQIRKIADRFMTTPTHIKVKAKEMTVENIDQSFIELKENQKFDVLCRLIDTDSP
ELSIIFGRTKKRVDEMTEGLVQRGYTADGLHGDLTQAKRDQVIRRFKKGTIDILVATDVA
ARGLDITGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGSAITFVTPREFGQIKTIERVTN
KKMSRRHAPTLDEILEGNLKLAAQELIKRVEAKNAQEYTTLAQELLEEYEAVELISAALK
GLTKEPDATPVQISSIEPIRVKRFGSNGGGGNRRPYGNKGGSGSGSSSNRSSGGYRGSNP
RGGERREGGRPSEGNRSSSTSSSSDRREGGYAGRNRSESDRNRGGRKPRFEK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgtgaattaaatcttagtgaggcacttatcaaaggtgtcctaaaaatg
ggctttgaagaagcaactccaatccaagcagaaacaattccagtcggtcttagcggcgtt
gacttaatcggtcaagcgcaaacaggaacagggaaaacagctgcattcggtattccaacg
atcgagcgtcttgacgcaaaatcacgccatatccaagcattaatccttgcaccaactcgt
gaacttgcgattcaagttgcagaagaactaaaccgcattggtgaagtaaaacgcgttcat
gccttgccagtatacggtggtcagcaaatcgaccgtcagattcgtgcgcttcgtaagaac
ccacaaatcgtcgtcgcgacacctggtcgtctaatggaccacatgaaccgtaaaacatta
aacctcgaccacgtccaaacagttatcttggatgaggcagatgaaatgttgaacatggga
ttcgtggaagatatcgaaaaaatcttgggtacacttccgccgactcgtcaaacactttta
ttctctgcgacaatgccgccgcagattcgtaaaatcgcagatcgtttcatgacgactccg
actcacatcaaagtaaaagcaaaagaaatgactgtcgaaaacatcgaccaatcatttatc
gaattaaaagaaaaccaaaaattcgatgtgctttgccgcttgattgatacggattctccg
gaactctcaatcatcttcggtcgtacgaaaaaacgtgttgatgagatgacagaaggactt
gtccaacgtggatacacggctgacggtttacacggtgacttaacacaagcaaaacgtgac
caagttatccgtcgtttcaaaaaaggaacaatcgatatccttgtagctacagacgtagcg
gcacgtggtcttgatattacaggcgttacacacgtttataactttgatgtcccgcaagat
ccagaaagctatgttcaccgtatcggccgtactggtcgtgctggtaaaacaggatcagcg
attacttttgttacaccacgtgaattcggtcagatcaaaacaatcgaacgtgttacaaac
aaaaaaatgtcgcgtcgtcatgcaccgacacttgatgaaatcctagaaggtaacttgaaa
cttgctgcacaagaattaatcaaacgtgtagaagcgaaaaatgctcaagagtatacaaca
ctcgctcaggaacttcttgaagagtacgaagcagttgaattgatttcagcagcacttaaa
ggattaacgaaagagccggatgcaacgccagttcaaatttcgtcaatcgaaccaatccgt
gtgaaacgttttggtagcaacggtggcggcggtaaccgtcgtccttacggtaacaaaggt
ggatcaggttctggttcttcttctaaccgtagcagtggcggataccgtggcagtaaccca
cgtggtggggagcgccgtgaaggcggtcgtccttctgaaggaaaccgtagcagcagcaca
tcttcttcttcagatcgtcgtgaaggtggatacgctggtcgtaaccgcagtgaaagtgat
cgtaaccgtggcggacgtaaaccacgttttgaaaagtaa
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