KEGG   Exiguobacterium sp. Helios: HNY42_05735
Entry
HNY42_05735       CDS       T10355                                 
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
  KO
K03086  RNA polymerase primary sigma factor
Organism
exh  Exiguobacterium sp. Helios
Pathway
exh02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:exh00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HNY42_05735 (rpoD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:exh03021]
    HNY42_05735 (rpoD)
Transcription machinery [BR:exh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HNY42_05735 (rpoD)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1 Exonuc_VII_L DUF2316
Other DBs
NCBI-ProteinID: QNR20452
LinkDB
Position
1119001..1120086
AA seq 361 aa
MAEKARSEAEILRLAKDELIALGHKNGELSHQKIEDKLSSFESMDAQQFEEFLQLLETEG
IKVNNDGTGDDKEEADLNDLSVPPGVKINDPVRMYLKEIGRVDLLNAEDEVELAKRIEQN
DEEAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDYTKGYKFSTYA
TWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTPEEISKEMEITP
EKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATAPQDAAAYELLKEQLEDVLDTL
TDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFL
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcagaaaaagcaagatcagaagcagaaatactccgtctcgcgaaggatgaactaatc
gcgctcggacacaagaatggtgaactatcgcatcaaaaaatcgaggataaactcagttcg
tttgaatcgatggatgcgcaacaattcgaagaattccttcaactgctcgaaacagaaggc
atcaaggtcaataacgatgggacgggtgacgacaaggaagaagcggatttaaacgatctt
tcggtcccgccgggcgttaaaatcaatgaccctgtccggatgtacttgaaagaaatcggg
cgtgtcgatctattgaacgccgaagatgaagtcgaactcgcgaaacgaattgagcagaac
gacgaagaagctaagaaacgtttagcggaagctaacttacgtttggtcgtttcgattgcg
aagcgttacgtcggtcgcggcatgctgttccttgatttgattcaagaaggaaacatggga
ctcatcaaagcggttgaaaagtttgactatacaaaaggatataaattctcgacttacgct
acctggtggattcgtcaggccatcacacgtgcaattgccgatcaggcacggacgatccgg
attccggttcatatggtcgaaacgatcaataaattgatccgtgtccaacgtcaattactt
caggatttaggacgtgaaccgactccggaagaaatttcgaaagaaatggaaatcacaccg
gaaaaagtacgtgagattctgaagattgcacaagaaccggtatcgctggaaacaccgatc
ggggaagaggacgattcacatctcggagacttcattgaagaccaggatgcgacagcccct
caagatgcagcggcctacgagttattgaaagaacagctcgaagatgtcctcgatacgttg
acggaccgcgaagaaaatgtgttacgtcttcgttttggtctagacgacggtcggacacgc
acacttgaagaagtcgggaaagtatttggtgtcacacgtgaacggattcgtcagattgag
gcgaaagcgttacggaaactacgtcatccaagtcgttcaaaacgtctaaaagatttcctc
gattaa

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