Exiguobacterium sp. Helios: HNY42_06620
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Entry
HNY42_06620 CDS
T10355
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
exh Exiguobacterium sp. Helios
Brite
KEGG Orthology (KO) [BR:
exh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
exh03009
]
HNY42_06620
Enzymes [BR:
exh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HNY42_06620
Ribosome biogenesis [BR:
exh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HNY42_06620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
DUF7393
Bac_chlorC
Motif
Other DBs
NCBI-ProteinID:
QNR20621
LinkDB
All DBs
Position
1288626..1289387
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AA seq
253 aa
AA seq
DB search
MERLQKIIAQAGVASRRKAEELITEGRVKVNGKVITELGTKVGGRAEVEVDGVKLEREEH
VYYMLYKPTGVVSTVEDDKGRKTVVDLVPPGHRVFPVGRLDYNTSGLLLLTNDGEFSNLL
LHPKYKVPKRYIVKIKGVPDYYHVKGLEKGVVLPDGFKTGKARVEMRDVDKKKNTAILEM
VIYEGHNRQVRQMVETLGAEVIKLKREQFGFLTLAGLTSGDWRELSKKEVNQLRELADPV
APPTKRRKNTKKR
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtctacaaaaaattattgcccaggccggtgtcgcatcacgacgcaaggcagaa
gaactaatcacagaaggtcgcgtcaaagtcaacgggaaagtcatcacggaactcgggacg
aaagtcggcggacgtgcagaagtcgaagtcgacggagtgaagctggaacgggaagaacac
gtttactacatgctgtataaaccaacaggtgtcgtttcgacggtagaagatgataaaggc
cgtaaaacggtcgtcgatcttgttcccccgggtcaccgcgtcttcccggtcggtcgtctt
gactacaacacaagcggattactgctgttgacaaacgacggcgagttttcgaatctcctg
ctccacccgaaatacaaagtaccgaaacgttacatcgtcaaaatcaaaggcgtgccggac
tactatcatgtcaaaggtcttgaaaaaggtgtcgtcttgccggacggattcaagaccggt
aaagcacgcgtcgagatgcgcgatgtcgataagaaaaaaaataccgcgattttagaaatg
gtcatctatgaaggccataaccgtcaagtccgtcaaatggtcgaaacactcggcgcagaa
gtcatcaagttgaaacgggaacagtttggtttcctgacgcttgctggattaacatcaggc
gactggcgtgaactttcgaaaaaagaagtcaatcaattgcgtgagctggcggatccggtt
gctccccctacgaaaagacgtaagaacacaaaaaaacgttaa
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