Exiguobacterium sp. Helios: HNY42_06695
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Entry
HNY42_06695 CDS
T10355
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
exh Exiguobacterium sp. Helios
Pathway
exh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
exh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNY42_06695 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
exh03019
]
HNY42_06695 (rny)
Messenger RNA biogenesis [BR:
exh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HNY42_06695 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
KH_2
DUF3149
DUF4229
Motif
Other DBs
NCBI-ProteinID:
QNR20636
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Position
1304365..1305927
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AA seq
520 aa
AA seq
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MGTTTWIVILLLAILIAFIVGYFLRKSIAEAKIQGAETEATKIVERAQVSAEATKKEALL
EAKDEAFKLRNEVEKELRERRQELTKQEGRLLQKEETLDRRVDSIDRKEEQINTRDAEIA
KRKHQAEELERKVEDLYEQGRQELVRVANLSQDEARAIIMDETKQAAMHDAAILQKEIEQ
KAKEEADKKARNILSLAIQRFAAEHIAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREVAKMALEKLVQDGRIHPARIEEMVDKSRREVDERIR
EIGEEATYDVGIHGIHPDLVKILGRLKYRTSYGQNVLFHSLEVAHLAGMMAAELGEDVTL
AKRAGLLHDIGKAIDHEVEGSHVEIGVELGTKYKEHPTVINAIASHHGDTEATSVISVLV
AAADALSAARPGARQETLESYIRRLERLEEISESFDGVEKSFAIQAGREVRIIVRPDVVD
DVLAHKMASDIRKKIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaacaacttggattgtcatacttctcctcgcaatactgatcgcattcatcgta
ggctacttcttgcggaaatcgattgcagaagcaaagattcaaggcgcggaaacagaagcg
acgaaaatcgtggaacgtgcacaagtatcagcggaagcaacgaaaaaagaagcattgctc
gaagcgaaagatgaagcctttaaacttcggaatgaagtcgaaaaagagcttcgtgaacgt
cgtcaagagttaacgaaacaagaaggacgattgctccaaaaagaagagacactcgatcgc
cgtgttgattccatcgaccgcaaggaagaacaaatcaatacgcgtgatgcagagatcgcg
aaacggaagcatcaagctgaagagttagaacgcaaagtagaggacctgtatgaacaggga
cgccaagagctcgtacgtgttgcgaatctttcgcaagacgaagccagagctatcatcatg
gatgagacgaaacaagctgccatgcacgatgcagccattcttcaaaaagaaatcgaacaa
aaagcaaaagaagaagcagacaaaaaagcacgcaacatcctttcacttgcgattcaacgg
ttcgccgcggaacatatcgcagagacgacggtttcggtcgtcaacttgccgaatgacgag
atgaaaggccggatcatcggtcgtgaaggccgtaacatccggaccctcgaaacgttaacg
ggtatcgatttaatcatcgatgacacaccggaagcggtcatcttgtccggatttgatccg
attcgccgggaagtggcgaagatggcccttgaaaaactcgttcaagacggtcggattcac
ccggcacgaattgaagagatggtcgacaaatcacgtcgggaagtcgacgaacggattcgt
gaaatcggtgaagaagcgacatatgatgtcgggattcacgggattcatccggatctcgtc
aaaattctcggccgcttgaagtatcggacaagttacggtcaaaacgtattgttccactca
ctcgaagtcgctcatcttgccggtatgatggcagcagagctcggtgaggatgtaacactt
gcgaaacgcgctggtctccttcacgatatcgggaaagcgattgaccacgaagtggaagga
agtcacgttgaaatcggagtggaacttggtacgaagtacaaagaacatccaaccgtcatc
aatgcgattgcttcccaccacggggatacggaagcgacatctgtcatttccgttctggtc
gcagcagcagatgccttatctgccgcccgtccaggtgcacgtcaagaaacactcgagagt
tacatccgacgtctcgaacgtctggaagaaatctcagaatcatttgacggggtagagaag
tcctttgcgattcaagcaggtcgtgaagtacggattatcgttcgtcctgatgtcgtcgac
gatgtccttgcccataagatggcaagcgatatccggaaaaaaatcgaagaagaacttgat
tatccgggtcatatcaaagtcacggtcattcgggaaacacgagcggtcgaatacgcaaaa
taa
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