Exiguobacterium sp. Helios: HNY42_11235
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Entry
HNY42_11235 CDS
T10355
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
exh Exiguobacterium sp. Helios
Brite
KEGG Orthology (KO) [BR:
exh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
exh03032
]
HNY42_11235 (topA)
03400 DNA repair and recombination proteins [BR:
exh03400
]
HNY42_11235 (topA)
Enzymes [BR:
exh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HNY42_11235 (topA)
DNA replication proteins [BR:
exh03032
]
Prokaryotic type
DNA Topoisomerases
HNY42_11235 (topA)
DNA repair and recombination proteins [BR:
exh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HNY42_11235 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Lar_restr_allev
Toprim_3
Zn_ribbon_5
Motif
Other DBs
NCBI-ProteinID:
QNR21481
LinkDB
All DBs
Position
complement(2137219..2139315)
Genome browser
AA seq
698 aa
AA seq
DB search
MAKYLVIVESPAKAKTIKRYLGSNYTVKASMGHVIDLPKSQMGVDVEHDYEPKYITIRGK
GPVLKELKTAAKKAQKIYLAADPDREGEAIAWHLAKALGVDESTECRVVFNEITKDAIKD
SFKRPRKINYDLVDAQQARRILDRLVGYSMSPLLWKKIKKGLSAGRVQSVAVKMIIDREQ
EINAFLPEEYWTIKLELDANGEKLEANFYGIDGKKRELHSEEEVNEVLAKLSESFTVDSV
TKKERRRNPALPFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGIELGKEGTVGLITYMRT
DSTRTSETANIEAQGFIENAYGKEYIAVEKRKEKKAANSQDAHEAVRPTSTMRDPQLVKS
YLSRDQFRLYKLIWERFVASQMAPAVLDTVKVDLVSNDVMFRANGSTVKFAGFMKVYIED
TDDETVTDVKDGLLPPLEDGEVLEQEMIEPKQHFTQPPPRYTEARLVRAMEELGIGRPST
YAPTLDTIQKRGYVTLEEKKFLPTELGELVIDMISDYFQEFITVQFTADMEALLDAIEKG
DMQWTEVVDPIYKSFEKRLTRAEAEIEKIEIKDEPAGEDCEVCGHAMVIKMGRYGKFMAC
SNFPECRNTKPIQVEIGVKCPTCGTGEIVERRSKKGRLFYGCSNYPECEFVSWDKPVEEP
CPVCSSMMVQKKIKNGVKVECTSCGHHETRIDQEQEEE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatatttagtaattgtcgaatcacctgcaaaggcaaaaaccatcaaacgttat
ctcggttcaaactataccgtgaaagcttcgatgggacatgtcatcgacttaccgaaaagt
caaatgggtgttgacgtagaacatgattatgaaccaaagtatattacgattcgtggtaaa
ggtccggttttaaaagaattaaaaacggccgctaaaaaagcacaaaaaatctatctcgca
gccgacccggaccgcgaaggggaagcaatcgcttggcatttagcgaaagccctcggtgtc
gatgaatcgacagaatgccgggtcgtctttaatgaaatcacgaaagacgccatcaaagat
tcgttcaagagaccccgcaagatcaactacgatcttgtcgatgcacaacaggcacggcgt
atcttggaccgtctcgtcggttacagcatgagtccgttactctggaagaaaattaaaaag
ggcttgtcagcaggacgtgttcaatcggttgccgtgaagatgatcattgaccgcgagcaa
gaaatcaatgcctttttaccagaagaatattggacgatcaaactagagcttgatgccaat
ggtgaaaagctcgaagccaacttctacgggattgacgggaagaaacgtgaattgcactca
gaagaggaagtcaatgaagtattggcaaaactttcagagtccttcacggtcgactccgtc
acgaaaaaagagcgtcgccggaatccagccttgccgtttacgacgagttcgctccaacaa
gaagcagcccgcaagctgaacttccgtgcgaagaagacgatgatgattgcccagcaatta
tatgaaggaatcgagctcggcaaagaaggaacggtcggtttgattacgtacatgcggacc
gattcaacccggacatccgaaaccgccaacatcgaagcgcaggggttcatcgaaaatgca
tacgggaaagaatacatcgctgtcgaaaaacggaaagagaaaaaagcagcgaattcgcaa
gatgcccacgaagctgttcgtccgacatcgacgatgcgtgacccgcaacttgtcaaatcg
tatttatcccgcgatcagttccggttatacaaattgatttgggaacggttcgttgcgagt
caaatggctccggctgttctcgatacagtcaaagtcgacttggtctcaaatgatgtcatg
ttccgggcaaacggttcgacggtcaaatttgccggattcatgaaagtctatattgaagat
acagacgatgagacggtaacggacgtcaaggacggtttgttgccgccgcttgaagacggt
gaagtcttggagcaggaaatgattgagccgaaacaacactttacgcaaccaccaccgcgg
tataccgaggcacgcctcgtccgggcgatggaagaacttgggattggtcgtccgtcgacg
tatgcgccgacactcgatacgatccaaaaacgtggttacgtgacgctcgaagagaaaaaa
ttcctgccgaccgaactcggggaactggtcatcgatatgatcagtgattatttccaagaa
ttcatcaccgttcaatttacggcggatatggaagcgttgctcgatgcaatcgaaaaaggg
gacatgcagtggacggaagtcgtcgatccgatttataaatcgttcgaaaagcgtctgaca
cgtgcagaagccgaaatcgaaaaaatcgaaattaaagacgaaccggccggagaagattgt
gaagtctgcggacacgcgatggtcatcaagatgggccgttatggaaaattcatggcgtgc
tcaaacttcccggaatgtcggaacacgaagccgattcaagttgagattggtgttaaatgt
ccgacgtgtggaacaggtgagatcgtggaacgccggagtaaaaaaggacgcttattctac
ggctgttcgaattatccggaatgtgaattcgtctcatgggataaaccggtcgaagaacca
tgtccggtttgtagcagtatgatggtacaaaagaaaatcaagaacggtgtgaaagtagaa
tgtacgtcttgcggacatcatgaaacacgcatcgatcaggagcaagaggaggaatga
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