Exiguobacterium sp. Helios: HNY42_12780
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Entry
HNY42_12780 CDS
T10355
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
exh Exiguobacterium sp. Helios
Pathway
exh03030
DNA replication
exh03410
Base excision repair
exh03420
Nucleotide excision repair
exh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
exh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNY42_12780 (polA)
03410 Base excision repair
HNY42_12780 (polA)
03420 Nucleotide excision repair
HNY42_12780 (polA)
03440 Homologous recombination
HNY42_12780 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
exh03032
]
HNY42_12780 (polA)
03400 DNA repair and recombination proteins [BR:
exh03400
]
HNY42_12780 (polA)
Enzymes [BR:
exh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNY42_12780 (polA)
DNA replication proteins [BR:
exh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HNY42_12780 (polA)
DNA repair and recombination proteins [BR:
exh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HNY42_12780 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNY42_12780 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QNR21777
LinkDB
All DBs
Position
complement(2448038..2450635)
Genome browser
AA seq
865 aa
AA seq
DB search
MMENKLLLIDGNSLTYRAFFALPPMTDAQGRNTNAAYGFTMMLLKLLEEEQPTHMLVAFD
ASSETFRHDVYQEYKGSREKTPSELREQFPIVRDICEALGIQMMELHRYEADDLIGTLAQ
TMPADRIRIVTGDKDLLQLVTDQVEVLITKRGITDVLCMTEELFAETYGGLKPIQMIDLK
GLMGDKSDNIPGVPGIGEKTAVKLISAYGSVEGLYEHVEDLKGKQKEKVIANEELARLSK
ELATIKLDVPLDVTLDDLQISDVDTQVPYSLFQSLGFKSLTNRFAPVVEEADKEQLNVQT
ITSFPTDVTDAVLVVEQLREDYMEEEIIGFGIATPNQIYVASLELVHDPAFRDWIESEHQ
KICLDAKQVAFALRKHGLKLTAFDDLLLAGYLLNLSGGTTLASIAGHYMLMAPNEESVLG
KGAKRLTPADEVLHPYLAEKARMIELLFPKVKEELKANQQFELYETLERPLSGVLAEMEW
TGIRVDVATLQEMQTDLGGRLHDLEQLIYGEVGEEFNINSPKQLGVILFEKLELPAFKKT
KTGYSTAADVLEKLRPLHPVIDHIMLYRELQKLQSTYVEGLQKVIKEDGKIHTRFAQTIA
QTGRLSSVNPNLQNIPVRIEEGRKIRKAFVPSESGWSLYAADYSQIELRVMAHMSEDKTL
VQAFLDDADIHTQTASSVFGVAPNDVTGNMRRQAKAVNFGIIYGISDYGLSQNLNISRKE
AQDFIDRYFELFPQIKLFMDAAIEKARMNGFVETLMNRRRNIPDINSKNFNLRGFAERTA
INTPIQGSAADIIKKAMLDVHAALEASPLQARLLLQVHDELIFEAPDEELDALKTLVKQA
MEQTVHLSVPLRVDGDAGHSWYETK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaacaaacttttattgattgatggaaattcactgacgtatcgagcttttttt
gcgttaccaccgatgacggatgcgcaaggacgcaatacgaatgcagcttacggttttacg
atgatgttgttgaaattacttgaagaggaacaaccgacacacatgctcgtcgcatttgat
gcatcaagcgaaacgttccggcatgacgtgtaccaagaatataaaggcagtcgtgaaaag
acgccttcagagctccgggaacagtttccgattgtccgggacatctgtgaagcgttaggc
attcaaatgatggaacttcaccgctacgaagcggatgacttgattgggacattggcacaa
acgatgccggctgatcgcatccgaatcgtgacgggagataaggatttacttcaactcgtg
acggatcaggtcgaagtgttgattacgaagcgtggtatcacagacgttctgtgtatgaca
gaagaattatttgctgaaacttacggcggattaaagccgattcagatgattgatctgaaa
ggtttgatgggcgataaatccgataatattccaggagttccgggaatcggtgaaaaaaca
gccgtcaaattgatttctgcttatggatcagtcgaaggtctgtacgaacatgtcgaagac
ttaaaagggaaacaaaaagaaaaagtcatcgcgaatgaagaattggcacggttgtcaaaa
gaactcgcgacaatcaagctggacgttccgcttgatgtcacactcgatgacttacagatc
agtgacgtcgatacacaagtaccgtattcattgttccaatcacttggctttaaatcctta
acgaaccggtttgctcccgtcgttgaagaagcggataaagaacagttaaacgtccaaacg
attacttctttcccgacagatgttacagatgctgtgttggtcgttgaacaactgcgtgaa
gattacatggaagaagagatcattggatttggtatcgcgacaccgaatcaaatttatgtc
gcgtccttggaacttgtccatgatccggccttccgtgattggattgaatcagaacatcaa
aaaatttgcctcgatgcgaagcaggtcgcgttcgctttacgtaaacacgggctgaaatta
acggcattcgatgacttgttgctcgccggttatttattaaacttgagcggaggaacgacc
ctggcgtcgattgccggacattatatgctgatggcaccgaatgaagagtctgtcttagga
aaaggcgcaaaacgtcttactccggcagacgaggtgttgcatccttacttggcggaaaaa
gcccgcatgattgaactgttattcccgaaagtcaaagaagaactgaaggcaaaccaacag
tttgagttatatgagacactggaacgtccattatccggcgtattggctgaaatggaatgg
accggaattcgcgtcgacgtggcaacacttcaggagatgcaaaccgatttgggaggacgt
ctacacgatttggaacaattgatttacggggaagtcggggaagagttcaatatcaattcg
ccgaaacagctcggcgtcatcctgttcgaaaaacttgaattacctgccttcaagaaaacg
aagaccggttattcaacagcggccgacgtactagaaaaacttcgtccgctacatccggtc
atcgaccacatcatgttgtaccgcgaattgcaaaaactgcaatcgacgtatgtcgaaggc
ttacagaaggtcatcaaggaagacggaaaaattcatacccgatttgctcaaacgattgct
cagacaggacgtctcagctccgttaatccgaacttacaaaacattccggtccggatcgaa
gaaggacgaaaaatccgaaaagcgtttgtgccgagtgaatcaggctggtccttgtacgcc
gccgactattcccaaatcgaattgcgggtcatggctcatatgtcggaagacaaaacactt
gtccaagcgttcttggatgatgccgatattcacacgcagacagcgagcagtgtctttggt
gtcgcaccgaatgacgtcacaggcaatatgcgtcgtcaggcgaaagccgtcaactttgga
atcatttacggaatcagtgattacggtttgtcgcagaacttgaatatttcacgtaaagag
gcgcaagacttcatcgaccgttatttcgaattgttcccgcaaatcaagttgttcatggat
gcagcgattgagaaagcacggatgaacggttttgtcgaaacgctgatgaatcgccgccgg
aatattcctgacatcaattcgaaaaactttaatttgcgcggttttgcggaacggacggcg
attaacacgccgatccaaggttcagcagccgatatcatcaaaaaagccatgctcgatgtc
catgccgccctggaagcatctccgttgcaggctcgtctgttactgcaagtgcacgatgaa
ttgatttttgaagcgccggatgaagagctggatgcgctcaagacgctagtcaaacaagcg
atggaacagacggttcacttgtctgtaccattacgtgttgatggtgatgccggtcattca
tggtacgaaaccaaataa
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