Exiguobacterium sp. Helios: HNY42_12850
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Entry
HNY42_12850 CDS
T10355
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
exh Exiguobacterium sp. Helios
Pathway
exh03030
DNA replication
exh03430
Mismatch repair
exh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
exh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNY42_12850
03430 Mismatch repair
HNY42_12850
03440 Homologous recombination
HNY42_12850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
exh03032
]
HNY42_12850
03400 DNA repair and recombination proteins [BR:
exh03400
]
HNY42_12850
Enzymes [BR:
exh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNY42_12850
DNA replication proteins [BR:
exh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HNY42_12850
DNA repair and recombination proteins [BR:
exh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HNY42_12850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QNR21789
LinkDB
All DBs
Position
complement(2464842..2468009)
Genome browser
AA seq
1055 aa
AA seq
DB search
MIQLNVRTAYSPLQSTIRMDRYLDEVKRRGFSAAAICETSLTGVPAFMAGCAQRELTPII
GLEQVIEPDELTILWYAKTSHGLKALYRLASEMPVEDYSQLIAVLEPKRQAPEDDSRLRR
LIAHWMGSAHKAKIFLGVKAVRSTVERDSREQYRQAANALGIETIPIDPVRYLFREEAEA
FQALRAIDEGSTFADQKVSRTAHFKLMEELHEQYTDRELRLLKQWGESQETLTLPFQSRP
LPQVSDDSNHALNRLAHDGLLAHGHVEEEATKRLQYELEVIEKTGFADYFLIVEDLVRHA
KVKGIRVGPGRGSAAGSLVSYALGITTVDPLKYGLLFERFLNPERISMPDIDIDIEDERR
EEVLEYLVERYGKQHVGQIGTLSTLGAKAALRDVARVLEFSKDETDAAAKQLGKVTTLQG
LEQQASIYRWFSGSEKRRQLLQLAQAIEGLPRQRSIHAAGVIIASDELIETTPVDLNASG
RFVTQYLMKAIEQQGLLKIDLLGLRNLTRLRQMEQLIQHTYPDFLVERIPDEDKATLRLF
AKGETDHIFQFESAGMKQTLREVKPNQFEDLVATMSLFRPGPMKFIDIYAKRKAGQPYQM
VHPILEEILTATYGVIVYQEQIMEITRRVAGFTLAQADLLRRAISKKSSQSVEAEKQRFI
EGALQNGFDLTVAETLYDQIERFAGYGFNRSHAVAYTKISYALGYMKAHYPQIFSLVSID
QPERLVRVMREKRLPVLPPDIWMSDYRSTLEGKGIRLGVQTLRGITEKDFQTLREAAKTS
QTITQLLSAVGWGKKERAKIELLLYSGALDRATHGDRGLAEQEVLDYFTMASNTLLPDEL
ASLGRRKTTAQTNRTATDWARLERESLGFWLTYSPLMTAMKPPVETTHFQTVSLEGNQTN
YLVCYIEQIREFKTKRAQTMAVMHAVDGYSTEEVVVFPQQYAAFKRSLYIGNVLLIEVKV
QEREGNRQFVLERLRPLGQDVLFVKLPSKNDLAVLERMLETVPGDIPVVVRYADTNETKS
LPGMYAIQQEEELMAQLRIRFGETNIILKNVPRSN
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgatccaactaaatgtccgtacagcatacagtcctttgcaaagtacgattcggatggat
cgttatctggatgaggtcaaacgacgcggcttttcagctgcagccatctgtgaaacgtcc
ttgaccggcgtgccggcgttcatggcaggttgtgcgcaacgggaactgactccgatcatc
ggactagaacaagtcatagaaccggatgaactcacgattttgtggtatgcgaagacgagt
catggactaaaagcactctaccggcttgccagtgagatgcctgttgaagactattcacaa
ttgattgctgtcctggaaccaaaacgccaagcaccggaagatgactcgcgtttacggcgt
ctcatcgcccactggatgggatcagcgcacaaagcgaagatttttctcggcgtcaaggcg
gtccggtcgaccgttgagcgcgacagcagggaacagtaccgtcaagcggcaaatgcgctc
ggaatcgaaacgattcccatcgatcctgttcgttatctgtttcgggaagaggcggaagcg
tttcaagctttgcgtgcgattgacgaagggtcgacgttcgctgatcaaaaagtcagtcga
acggctcactttaaactaatggaggagttgcacgagcagtatactgatcgggaactgcgg
ttgctgaaacaatggggagagtcgcaggaaacattgacgttgccgtttcaatcacgtcct
ctcccgcaagtatcggatgattcaaatcatgcattgaaccgtttggcgcatgatggcttg
ctcgcacatggacatgtcgaggaagaagcgacaaaacggttgcagtatgaactggaagtc
attgaaaaaacgggatttgctgattactttctgatcgtcgaagatttagtgcgccatgcg
aaggtaaaaggcatccgtgtaggaccgggacggggctcggccgcagggtcgctcgtcagt
tatgctctcgggattacgacggtagacccactgaaatacgggttgttatttgaacggttc
ttaaatccggagcggatctcgatgcccgatatcgatattgatatcgaagatgagcggcgg
gaagaagtgcttgagtacctggtcgaacggtacgggaagcaacatgtcggtcagatcgga
acgttatcgactcttggagcgaaagcagcattacgcgatgttgcacgggtgttggagttt
tctaaagatgaaacagatgcggcagcgaaacagttgggaaaagtgacgacattacaaggc
cttgaacaacaggcttccatttaccgctggttctcgggcagtgaaaaacgacgccaatta
ctgcagcttgctcaagcaattgaaggattaccacgccaacgttccattcatgctgccggt
gtcatcatcgcatcagatgagttgatcgagacgacaccggttgatttgaatgccagcgga
cggttcgttacacaatatctaatgaaggccatcgaacaacaaggattgctgaagattgac
ttattggggttacggaatttaacacgactgcggcagatggaacaattgattcaacatacg
taccccgatttcttggtggaacggataccggacgaggacaaagcgacgttacgattgttc
gccaaaggggagacggatcacatcttccaatttgagtcggccggaatgaaacagacgtta
cgggaggtcaagcccaatcagttcgaggatctggtcgcgacgatgtcactgttccgtccg
ggaccgatgaaattcatcgatatctatgcgaaacgaaaagccggtcaaccctatcaaatg
gtccatccgattttagaagagattttaaccgcgacgtacggcgtcatcgtctaccaagaa
caaattatggagattacacgccgggtcgccggattcaccttggcgcaagctgatttatta
cggcgggcaatctcgaaaaaaagcagtcagtctgtagaggcggaaaaacaacgatttatt
gaaggggcgctgcaaaacggttttgatttaacggtcgccgaaacgttgtacgatcaaatt
gaacggtttgccggatacggatttaaccgtagtcatgccgtggcgtatacgaaaatcagt
tatgccctcggatacatgaaggcccattatccacaaatcttttcattggtatcgatcgat
caaccggaacgtctcgtgcgtgtcatgcgggaaaaacgtcttccggtactgccgcctgat
atttggatgtcggattaccgttcgacattagaaggtaaaggaatccggctcggcgttcaa
acacttcggggaatcacggaaaaagattttcagacgttacgggaagcggccaaaacctcg
caaacgattacacaattattgtcagcagttggttgggggaaaaaagaacgggctaagatt
gaacttttgttatacagcggagcgctcgatcgggcaactcatggagaccgtgggctagcg
gaacaggaagtccttgactactttacgatggcttcgaatacacttcttccggatgaactc
gcaagtctcgggcgaagaaagacaacggcacaaacgaaccggacagcaacggattgggca
cgccttgagcgtgaatcactcggattttggttgacctattccccattgatgaccgcgatg
aagccgccggttgaaacgacgcattttcaaacggtttcccttgaaggcaatcaaaccaat
tacctggtctgttatattgagcaaatccgtgaatttaagacaaaacgcgcccaaacgatg
gcggtcatgcatgccgttgatgggtattcgacggaagaagttgtcgtttttccgcaacag
tatgcagcgtttaaacgttcgttgtatatcggaaacgtcttgttgattgaagtgaaggtg
caggaacgcgaagggaaccggcaattcgtcctggagcggttacgtcctttagggcaagat
gtgttattcgtcaaactaccgtccaaaaatgatctcgcggttcttgagcggatgctcgag
accgtccccggggatattccggtcgtcgttcgttatgccgatacgaatgagaccaaatca
ctgccgggaatgtatgccatccaacaggaagaagaattgatggcgcaactccggattcga
ttcggggaaacgaatatcatcttgaaaaatgtccctcgttcgaactag
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