Exiguobacterium sp. N4-1P: A0126_02305
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Entry
A0126_02305 CDS
T10338
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
exi Exiguobacterium sp. N4-1P
Pathway
exi03420
Nucleotide excision repair
exi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
exi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0126_02305 (pcrA)
03430 Mismatch repair
A0126_02305 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exi03400
]
A0126_02305 (pcrA)
Enzymes [BR:
exi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0126_02305 (pcrA)
DNA repair and recombination proteins [BR:
exi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0126_02305 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
A0126_02305 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
ASI34453
LinkDB
All DBs
Position
436243..438468
Genome browser
AA seq
741 aa
AA seq
DB search
MFNLSEQLVSGLNPEQAKAVKHTDGPLLIMAGAGSGKTRVLTHRVAYLMAEKQVAPWNIL
AITFTNKAAREMRDRIGRLVGGVANDIWVSTFHSMCVRMLRRDIDKLGYDRNFTILDSSD
QQSALKLVLKEQNLDPKKWDPRSMLSIISSQKNELRSAEFYASIVTNPYEKTVAEIYKGY
ESVLRRNNALDFDDLIGKTTELFKQAPDVLAFYQKKFRYIHVDEYQDTNKAQYDLVNLLA
AAHQNLCVVGDSDQSIYRWRGADIANILSFEEDYPTARVILLEQNYRSSKRILDAANHVI
KNNSTRKDKKLWTENLEGEKLIIHTAENEREEAFYIVQEIRNSLRYGMKLNDIAILYRTN
AQSRAIEETLLKSNVPYKMIGGTKFYDRKEIKDVLAYLRLISNPNEDLSFARIVNEPKRG
IGATTIDKLRDFADLQGVSLMDAIRDIELSNIAPKTAAKLTDFRTMIMGLRQMQEFISIS
ELVEEVLEKSGYRQVLKEDKTLEAQSRLENINEFITVAQNFEKETEGEDPEDRTIIAFLT
DLTLVADVDSLDETDPGEQVTLMTLHSAKGLEFPVVFLIGMEEGLFPHSRSLQDEDEMEE
ERRLAYVGITRAEKRLYLSHARMRSLYGRTNANQESRFLAELPEEVIERTGKKPKPLPWE
DRPVPQGKAVIGRSVTKPTAMKTSGAESLGWNVGDKAEHGKWGQGTVVQTRGSGDSLEID
IAFPAVGIKRLLAKFAPIKKV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatttaagtgaacagctcgtgagcggattgaatccggagcaggcgaaagcggtc
aaacatacggacggtcccttgctgatcatggcaggagccggttcagggaaaacacgtgtt
ttgacgcatcgtgtcgcctatttgatggcggaaaaacaagtcgcaccatggaacatctta
gcgattacctttacgaataaagccgcacgggaaatgcgtgaccgaatcggtcgtttagtc
ggcggggtcgcaaacgacatctgggtctcgaccttccactcgatgtgtgtccggatgtta
cgtcgtgatatcgataagcttggttacgaccggaactttacaatccttgattcaagcgat
cagcagtcggcacttaaattggtcttgaaagaacagaaccttgatccgaagaaatgggat
ccacggtcgatgctttctattatttcaagtcaaaaaaatgaattacggagtgctgagttc
tatgcgtcaatcgtgacgaatccatatgaaaaaacagtcgctgaaatttataaaggatac
gaatccgtcttacgccgcaataatgcgctcgatttcgatgacttgattgggaagacaaca
gagttattcaaacaagcaccggacgtactcgccttttatcaaaaaaaattccgttacatc
catgtcgatgagtatcaagatacgaacaaagcccaatacgatctcgttaacttattagca
gccgcacatcaaaacctctgtgtcgtcggtgactccgatcagtcgatttatcgctggcgt
ggtgcggatatcgcgaacatcttgtcgtttgaagaggattatccgacagcccgcgtcatc
ttgctcgaacaaaactatcgttcgtccaaacgaattcttgatgcggcaaaccatgtcatc
aaaaacaacagtacacgaaaagataaaaagctgtggacggaaaatctcgaaggggaaaaa
ttgattatccatacggcggaaaacgagcgggaagaggccttttacatcgttcaagaaatt
cgcaattcgctacgttacgggatgaagcttaacgacatcgcaattttgtaccggacgaac
gctcaatcgcgtgcaatcgaggaaacgttactgaagtcaaacgtaccgtacaaaatgatt
ggcggaacaaagttctacgatcgaaaagaaatcaaagacgttcttgcctatctccgcctg
atttcgaacccgaacgaggatttatcctttgcccgaatcgtcaatgaaccgaaacgagga
atcggggcgacaacgattgataaattacgtgacttcgctgatcttcagggtgtgtccttg
atggatgccatccgtgatatcgaattgtcgaatatcgcaccaaagacggcagctaaattg
acggatttccggacgatgatcatggggttacgtcagatgcaggaatttatcagcatctcg
gagctcgtcgaggaagttcttgaaaaatcaggctatcgtcaagtcttaaaggaagacaag
acgcttgaagcacaaagtcgtcttgagaacatcaacgagttcatcactgtcgcgcaaaac
ttcgagaaggagacagaaggagaagatccggaagaccggacgatcattgccttcttgacc
gacttgacactcgtcgccgatgttgattcgcttgatgaaacggatccaggtgagcaagtc
acgttgatgacgttgcactcggcgaaagggcttgagttcccggtcgtcttcctgattgga
atggaagaaggtttgttcccgcacagccgttcgttgcaagatgaagacgagatggaagaa
gaacgccgcctggcctacgtcggcatcacgcgagcagaaaaacgactttatctctcgcat
gcgcggatgcgctcgttatacggacggacaaatgcgaaccaagaatcgcgtttcttagcc
gagttaccggaagaagttatcgaacggactggtaaaaaacccaaaccactcccatgggaa
gatcgtccggttccgcaagggaaagctgttatcggtcgttcggtcacgaaaccgacagcg
atgaaaacatccggcgccgagtcacttggctggaatgtcggggacaaggcagagcatggt
aagtgggggcaaggaacggtcgtccaaacacgtgggtctggcgatagtcttgagattgat
atcgcgttcccggcagtcgggattaaacggctgcttgcaaaattcgcaccaattaaaaag
gtatga
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integrated database retrieval system
