Exiguobacterium sp. N4-1P: A0126_05180
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Entry
A0126_05180 CDS
T10338
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
exi Exiguobacterium sp. N4-1P
Pathway
exi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
exi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0126_05180 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
exi03019
]
A0126_05180 (rny)
Messenger RNA biogenesis [BR:
exi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A0126_05180 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
KH_2
ATP-synt_8
DUF4083
DUF3149
Motif
Other DBs
NCBI-ProteinID:
ASI34977
LinkDB
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Position
1016261..1017823
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AA seq
520 aa
AA seq
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MDTITWIIILLLTLLIAFIVGYFLRKSIAEAKIQGAETEATKIVERAQVSAEATKKEALL
EAKDEAFKLRNEVEKELRERRQELTKQEARLLQKEETLDRRVDSIDRKEDQINTRDAEIA
KRKQQAEALERKVEDLYEEGRQELVRVANLSQDEARAIIMDETKQAALHDAAMLQKEIEQ
KAKEEADKKARNILSLAIQRFAAEHIAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREVAKMALEKLVQDGRIHPARIEEMVDKSRREVDERIR
EIGEEATYDVGIHGIHPDLVKILGRLKYRTSYGQNVLFHSLEVAHLAGMMAAELGEDVTL
AKRAGLLHDIGKAIDHEVEGSHVEIGVELGTKYKEHPTVINAIASHHGDTEATSVISVLV
AAADALSAARPGARQETLESYIRRLERLEEISESFDGVEKSFAIQAGREVRIIVRPDVVD
DVLAHKMASDIRKKIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatacaataacttggattatcatacttctcctcactttgctcatcgcattcatcgta
ggctacttcttgcggaaatcgattgctgaagcaaagattcaaggcgcggaaaccgaagcg
acaaaaatcgtcgaacgggcacaagtgtcagcggaagcaacgaaaaaagaagcattactc
gaagcgaaagacgaagcctttaaacttcgcaatgaagtagaaaaagaacttcgtgaacgt
cgtcaagagctaacaaaacaagaagcccgcttgctccaaaaagaagagactctcgatcgc
cgtgtcgactcaatcgaccgaaaggaagatcaaatcaacacacgagacgctgagatcgcg
aagcggaagcaacaagctgaagcgttagaacgcaaagttgaggatctgtatgaagaaggt
cgccaagagctcgtacgtgttgcgaatctttcgcaagacgaagcgcgcgctatcatcatg
gatgagacaaaacaagctgcgctgcatgatgcggcaatgctacaaaaagaaatcgaacaa
aaagcaaaagaagaagccgacaagaaagcacgtaacatcttgtccctcgcgattcaacgg
ttcgccgctgaacatatcgctgagacgacggtatctgtcgtcaacctaccgaatgatgag
atgaagggtcgaatcatcggtcgtgaaggtcgtaacattcggacacttgaaacgttaacg
ggaatcgatttaatcatcgatgatacaccggaagctgttatcttgtctggatttgatcca
attcgtcgtgaagtggcgaagatggcgcttgaaaagcttgtccaagacggtcgaattcat
ccggcacggattgaagagatggtcgacaaatcacgtcgcgaagtcgatgagcgaattcgc
gaaatcggagaagaagcgacatatgatgtcgggattcatggaatccacccggatctcgtc
aagattctcggtcgcttgaaataccggacgagttacggacaaaacgtcttgttccactca
cttgaagtcgcgcatcttgcgggaatgatggcagcggaacttggcgaagatgtcacgctt
gcgaaacgggcaggtctcctgcacgatatcggaaaagcgattgaccatgaagtggaagga
agtcatgttgagattggtgtcgagctcggtacgaagtacaaagagcatccgacagtcatc
aatgcgattgcttctcaccatggtgatacggaagcgacttcggtcatctccgtccttgtc
gcggcagcagacgcactttcagcagcacgtccaggtgcacgacaagaaacgcttgaaagt
tacattcgacgcctcgaacgtttggaagaaatttcagaatcattcgatggtgttgaaaaa
tcgtttgcgattcaagccggtcgtgaagttcggattatcgtccgtcctgacgttgtcgat
gatgtcttagcacacaagatggcgagtgatatccggaagaaaatcgaagaagaactcgat
tatccgggtcatatcaaggtcacggtcattcgggaaacacgagcagtcgaatacgcaaaa
taa
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