KEGG   Exiguobacterium sp. N4-1P: A0126_05180
Entry
A0126_05180       CDS       T10338                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
exi  Exiguobacterium sp. N4-1P
Pathway
exi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:exi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A0126_05180 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:exi03019]
    A0126_05180 (rny)
Messenger RNA biogenesis [BR:exi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A0126_05180 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_NusA_2nd KH_2 ATP-synt_8 DUF4083 DUF3149
Other DBs
NCBI-ProteinID: ASI34977
LinkDB
Position
1016261..1017823
AA seq 520 aa
MDTITWIIILLLTLLIAFIVGYFLRKSIAEAKIQGAETEATKIVERAQVSAEATKKEALL
EAKDEAFKLRNEVEKELRERRQELTKQEARLLQKEETLDRRVDSIDRKEDQINTRDAEIA
KRKQQAEALERKVEDLYEEGRQELVRVANLSQDEARAIIMDETKQAALHDAAMLQKEIEQ
KAKEEADKKARNILSLAIQRFAAEHIAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREVAKMALEKLVQDGRIHPARIEEMVDKSRREVDERIR
EIGEEATYDVGIHGIHPDLVKILGRLKYRTSYGQNVLFHSLEVAHLAGMMAAELGEDVTL
AKRAGLLHDIGKAIDHEVEGSHVEIGVELGTKYKEHPTVINAIASHHGDTEATSVISVLV
AAADALSAARPGARQETLESYIRRLERLEEISESFDGVEKSFAIQAGREVRIIVRPDVVD
DVLAHKMASDIRKKIEEELDYPGHIKVTVIRETRAVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggatacaataacttggattatcatacttctcctcactttgctcatcgcattcatcgta
ggctacttcttgcggaaatcgattgctgaagcaaagattcaaggcgcggaaaccgaagcg
acaaaaatcgtcgaacgggcacaagtgtcagcggaagcaacgaaaaaagaagcattactc
gaagcgaaagacgaagcctttaaacttcgcaatgaagtagaaaaagaacttcgtgaacgt
cgtcaagagctaacaaaacaagaagcccgcttgctccaaaaagaagagactctcgatcgc
cgtgtcgactcaatcgaccgaaaggaagatcaaatcaacacacgagacgctgagatcgcg
aagcggaagcaacaagctgaagcgttagaacgcaaagttgaggatctgtatgaagaaggt
cgccaagagctcgtacgtgttgcgaatctttcgcaagacgaagcgcgcgctatcatcatg
gatgagacaaaacaagctgcgctgcatgatgcggcaatgctacaaaaagaaatcgaacaa
aaagcaaaagaagaagccgacaagaaagcacgtaacatcttgtccctcgcgattcaacgg
ttcgccgctgaacatatcgctgagacgacggtatctgtcgtcaacctaccgaatgatgag
atgaagggtcgaatcatcggtcgtgaaggtcgtaacattcggacacttgaaacgttaacg
ggaatcgatttaatcatcgatgatacaccggaagctgttatcttgtctggatttgatcca
attcgtcgtgaagtggcgaagatggcgcttgaaaagcttgtccaagacggtcgaattcat
ccggcacggattgaagagatggtcgacaaatcacgtcgcgaagtcgatgagcgaattcgc
gaaatcggagaagaagcgacatatgatgtcgggattcatggaatccacccggatctcgtc
aagattctcggtcgcttgaaataccggacgagttacggacaaaacgtcttgttccactca
cttgaagtcgcgcatcttgcgggaatgatggcagcggaacttggcgaagatgtcacgctt
gcgaaacgggcaggtctcctgcacgatatcggaaaagcgattgaccatgaagtggaagga
agtcatgttgagattggtgtcgagctcggtacgaagtacaaagagcatccgacagtcatc
aatgcgattgcttctcaccatggtgatacggaagcgacttcggtcatctccgtccttgtc
gcggcagcagacgcactttcagcagcacgtccaggtgcacgacaagaaacgcttgaaagt
tacattcgacgcctcgaacgtttggaagaaatttcagaatcattcgatggtgttgaaaaa
tcgtttgcgattcaagccggtcgtgaagttcggattatcgtccgtcctgacgttgtcgat
gatgtcttagcacacaagatggcgagtgatatccggaagaaaatcgaagaagaactcgat
tatccgggtcatatcaaggtcacggtcattcgggaaacacgagcagtcgaatacgcaaaa
taa

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