Exiguobacterium sp. N4-1P: A0126_08595
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Entry
A0126_08595 CDS
T10338
Name
(GenBank) DNA-binding protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
exi Exiguobacterium sp. N4-1P
Brite
KEGG Orthology (KO) [BR:
exi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
exi03019
]
A0126_08595
Messenger RNA biogenesis [BR:
exi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A0126_08595
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
Cas3_HD
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
ASI35616
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All DBs
Position
complement(1639961..1641187)
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AA seq
408 aa
AA seq
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MMDNRDERSDSEMIRLFKAIPEQQMPPYLGDEFVVDVSNASGGFLIERHVPGEQIEETLL
VASAEIRTSQTGREWLQFTFNSSSGSCKGKQWLNQGTAEEAMRPYLETRIVHVTAKVEEY
PVDSGNKSLTVQRVKAVHDVAGTTLLPQMPMEESASDYRDQLIGLVEQMQQPYRQIALRC
LNLYWDDFSTRPAALFHHHAYIGGLMKHTACMMTIAAGICQSERPYLTLLKCIQEAEADH
KNDLFQAPERATRQFAWDDSFDSLYQAARSITLLDQEPNQDELLLGVLLHDIGKIWEYNH
LGATPSRFTDLLQVDAAEETLSGIAIDPLGSLVGHMPYGCFVFERALRDEALRIPLDMHH
RMMHLILSHHGKKEWGSSVTPQTTEAWYLHAIDLLDARKEKWRTAQLL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaatagagatgagaggagtgattcggaaatgattcgcttatttaaagcaatt
ccagagcaacagatgccaccttaccttggggatgaatttgtggttgacgtatcaaatgcg
tcaggcggctttttgattgaacgtcacgttccgggagaacaaatcgaagagacactttta
gtcgcttctgcggaaatcagaacgagtcagacagggcgtgaatggttacagtttacattc
aattcatcgagtggttcttgtaaaggaaaacaatggttgaatcaaggaacggcggaagag
gcgatgcgtccttatctagagacgcggatcgtccacgttactgccaaggtcgaggaatat
cccgtcgactcaggcaataagtcgttgactgttcaacgcgtcaaggccgtccatgatgtc
gctggaacgacattgttacctcagatgccgatggaagagtctgcgagcgattaccgggat
caattgattggcctagtcgagcaaatgcaacaaccttaccgccagattgccctgcgttgt
ctaaacttgtattgggatgatttttcgacgagaccagcggcattgttccatcaccatgcc
tatattggtgggttgatgaagcacactgcttgtatgatgacgatcgcggcaggaatctgt
caatcggagcgaccttatttgacgttactcaagtgtattcaagaagcagaagctgatcat
aaaaacgatttatttcaagctcctgagcgagcgacacgtcaatttgcctgggacgacagc
ttcgattctctttatcaggcggcacggtcgattacgcttctcgatcaagaaccgaatcag
gatgaactcttgttaggtgtcttgttgcatgacatcggaaagatttgggagtataatcat
ctcggcgcaacaccaagtcgcttcacggacttactgcaagtcgatgcggcagaggaaacg
ttatccggtattgcgattgatccgcttggaagtctagtcggacatatgccatacggctgt
tttgtgttcgaacgcgcgttgcgtgacgaggcactccggattccgttagacatgcatcat
cggatgatgcatctcatcttatcgcatcatggaaaaaaagaatggggttcaagtgtcaca
ccacaaacaacggaagcctggtatttgcatgcgattgatttactggacgcacgaaaagag
aaatggcgaacggcacaactgctgtaa
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