Exiguobacterium sp. N4-1P: A0126_09025
Help
Entry
A0126_09025 CDS
T10338
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
exi Exiguobacterium sp. N4-1P
Pathway
exi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
exi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0126_09025 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
exi03019
]
A0126_09025 (pnp)
03016 Transfer RNA biogenesis [BR:
exi03016
]
A0126_09025 (pnp)
Enzymes [BR:
exi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A0126_09025 (pnp)
Messenger RNA biogenesis [BR:
exi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A0126_09025 (pnp)
Transfer RNA biogenesis [BR:
exi03016
]
Prokaryotic type
tRNA degradation factors
A0126_09025 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
RNase_II_C_S1
SPATA25
DUF3284
MIOX
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ASI35697
LinkDB
All DBs
Position
complement(1724897..1727116)
Genome browser
AA seq
739 aa
AA seq
DB search
MSQTKQTFSTELGGRTLTIEIGQLAKQANGAAMIRYGETAVLATVVASKQPKDLDFFPLT
VNYEEKLYAAGKIPGGFLKREGRPGENAILTSRLIDRPIRPLFPEGFRHDIQVATTVLSS
DADNSSEVAAMIGASIALSISDIPFDGPIAGVTIGRVDGEFIINPTASQSEASDIDLQVA
GTKHAVNMVEAGAKEVPEEAMLEAILLGHDVIKELIAFQEEIVAAVGKEKFAYTVSSFDE
ALVARLKTEALAEVTTAVQVEEKQARDVAINEVISKYIDLYAADESVTEAQLAEVSGVLN
KFVKAEVRRLITEDKVRPDGRGLAEIRPLDSEIGLLPRAHGSGLFTRGQTQVLSVATLGV
AGDAQIIDGLGLKEEKRFMHHYNFPPFSVGEARPMRAPGRREIGHGALGERALQPVLPSE
TDFPYTIRLVSEVLESNGSSSQASICGSILAMMDAGVPLKAPVAGIAMGLIKEGENYSIL
TDIQGMEDHLGDMDFKVAGTKDGVTALQMDMKIGGITRQILEEALEQARLGRLHILEHMN
SIIAEPRVELSKYAPKIVTLKINPDKIRDVIGPGGKVINAIIDETGVKIDIDQDGTVFIA
STDQDGINRARQLVEDIVREVVIGEEFDGTVRRIEKFGAFVELFKGKDALVHISELALDR
VGQTEDVVKLGDKLKVRVTEVDDKGRVNASHKILLVEGMSAEDRAAYDEKKKTERDNRPP
RRDTGSRPPRDGQRPPRRN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacaaaacagacgttttcgaccgaactcggtggacgtactttaacaattgaa
atcggtcaactggccaaacaagcgaacggggcagcgatgattcgctatggcgagacagcc
gtcctcgcaacagtcgttgcgtcgaagcaaccgaaagacttggatttcttcccattaaca
gtgaactatgaagaaaaattatacgcagcaggtaaaattccaggaggttttttaaaacgt
gaaggccgtcctggagaaaacgcgattttaacttcacgattaattgaccgtccgattcgt
ccactcttcccagaaggattccgtcatgacattcaagtcgcgacgacagttctttcttca
gatgcggacaactcgtcagaagtcgcagcgatgattggtgcttcgattgccctttccatc
tcggatattccgtttgacggtccaatcgctggtgtgacgattggtcgcgttgatggagag
ttcatcatcaacccaacggcaagtcagtcggaagcaagcgatatcgatttacaagtcgca
gggacaaaacatgccgtcaacatggtcgaagccggtgcgaaggaagtaccggaagaagcg
atgctcgaagcgattcttctcggacatgacgtcatcaaagaattgattgcgttccaagag
gaaatcgttgctgccgtcgggaaagagaaatttgcctacacggtgtcatcatttgatgaa
gcacttgttgcgcgtctgaagacggaagcattagcagaagtcacgacagcggttcaagtc
gaagaaaaacaagcgcgtgacgttgcgatcaacgaagtcatctcaaaatatattgatctt
tacgcagccgacgagtcggtcacggaagcacaacttgctgaagtttctggtgtattgaat
aagttcgtcaaagcggaagttcgtcgtctcatcacagaagataaagtacgtccggatggt
cgtggacttgctgaaattcgtccgctcgactcagaaatcggtctcttgccacgtgctcat
ggttctggactctttacacgtggtcaaacacaagtcttgtctgtcgcgacgcttggtgtc
gctggagacgcacaaatcatcgatggacttggtttgaaagaagaaaaacggttcatgcac
cattacaacttcccgccgttctcagtcggggaagcgcgtccaatgcgtgcaccaggtcgt
cgtgaaattggtcacggagcacttggagagcgtgccttacagcctgtcttgccatcagaa
acagatttcccgtatacgattcgtctcgtctcggaagtgcttgaatcaaatggatcttca
tcacaagcctcaatctgtggatcaatcctcgcgatgatggatgccggtgtcccgcttaaa
gcaccagttgcaggaatcgcgatgggattaattaaagaaggcgaaaattattcaatctta
acagacattcaaggtatggaagatcacctcggcgacatggactttaaagtcgcaggaaca
aaagatggtgtaactgctttacaaatggatatgaagattggcggcatcacgcgtcaaatt
cttgaagaggcgctcgaacaagcacgccttggccgtttacacattcttgaacacatgaat
tcgatcattgcagaaccacgtgtcgagttatcgaaatatgcaccgaaaatcgtaaccctc
aaaatcaatccggataaaatccgtgatgtgattggacccggcggtaaagtcatcaatgca
atcatcgatgaaacaggcgtcaagattgatatcgaccaagatggtacggtctttatcgca
tcgacagatcaagatggcattaatcgtgcacgtcaactcgtcgaggacatcgttcgtgaa
gtcgtcatcggtgaagagtttgacgggacagtccgccggattgagaaattcggagcgttc
gttgagttgttcaaaggaaaagacgcactcgtccacatctctgagcttgcacttgatcgt
gtcggtcaaacggaagatgtcgtcaaactcggcgacaagctgaaagtccgtgtcacagaa
gttgatgataaaggtcgtgtcaacgcctcacataaaatccttctcgtcgaaggaatgagc
gcggaagaccgtgcagcatacgatgaaaagaaaaaaacagagcgtgacaaccgcccgcca
cgtcgggatacaggatctcgcccaccacgtgacggacaacgtccaccacgtcgtaactaa
DBGET
integrated database retrieval system
