Exiguobacterium sp. N4-1P: A0126_10300
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Entry
A0126_10300 CDS
T10338
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
exi Exiguobacterium sp. N4-1P
Pathway
exi03410
Base excision repair
exi03430
Mismatch repair
exi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
exi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0126_10300 (recJ)
03430 Mismatch repair
A0126_10300 (recJ)
03440 Homologous recombination
A0126_10300 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exi03400
]
A0126_10300 (recJ)
DNA repair and recombination proteins [BR:
exi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A0126_10300 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A0126_10300 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A0126_10300 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ASI35947
LinkDB
All DBs
Position
complement(1977096..1979405)
Genome browser
AA seq
769 aa
AA seq
DB search
MYHSKKTWLDKAVDPLKIDELVAQASVSPNVARLLVQRGLETPAQATAFLEAGQMPFHDP
FLFQDMEKVVARIKEAADQGEMILIYGDYDVDGVSSAAILWHALTEIGAMAECYIPNRFT
EGYGPNEAAFRWAVEEGFGLIITVDCGISGIKEAAVLKELGVDLIITDHHEAKEVLPDAY
AMIHPGVDRNYPFSKLAGAGVAFKVAHALLERVPTELLDLAVLGTIADLVPLVDENRLLA
TKGIEALNGSERPGILALRQVCSLTEDELTEESVGFAFGPRINAAGRLDSAMPALEMLLA
ETLEEAVVLANQLDQQNKQRQDIVKQIAEEATALVEEKYLEDRVLVVDADNWNPGVVGIV
ASRLVEKYHRPVIMLCHDAEKGTAKGSGRSIAAFDLFAELTLCEDILPHFGGHPAAAGMT
LSSDDVVTLRERLNAQAAKLPDEAFIATIEIDLRLCVSDVSIGLIEEIGRLAPFGMGNPA
PRIVIEDAKIRDMKRIGRDLTHLKALLSDGTSELDGIGFGFGDAVDEISLLAEVSLMGSL
NINEWNGFRKPQLMIQDLAVADYQLFDYRGGKKPLTDIFELPQEQTTLVAFSDETKQKYA
ERPLNGAIHENVVFLDLPETEEAFLPYLKQAERIYCAFKDEGYYFEAIPSREDFKHYFNY
FAKCPREELRIGLVRLSKTRKWSKRSINFMHSVFSELDFLVTMEDGLPGVNPDAEKRDLT
EAATYKRHEERQRLEQQYIYSSLAQLKERFDTLVEAAKQEEMTWSSNSI
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtatcattcaaaaaaaacatggctcgacaaagcagtcgatccgctaaaaatagacgag
ctggtcgcgcaagcgtccgtctcaccgaacgtagcccgtctgctagtccagcgtggtctc
gagacgccggctcaggcaacggcctttttagaagcaggacaaatgccgttccacgatcca
ttcctgtttcaggatatggaaaaagtcgtcgcacggattaaagaagctgccgatcaaggt
gaaatgattttaatttatggggattatgatgtcgatggtgtcagttcggctgcgattttg
tggcatgcgttaactgaaatcggggcaatggcagaatgttatatcccgaaccggttcacg
gaaggctacggaccgaatgaagcggccttccgctgggcggtcgaagaaggattcggatta
atcatcacggtcgactgcgggatttcaggtatcaaggaagcagccgtcttaaaagagtta
ggtgtcgacctcatcatcaccgatcaccatgaggcgaaagaagttctcccggacgcctat
gcgatgattcacccgggtgtcgatcgcaactatccgttctcaaaactcgctggggcaggt
gttgcctttaaagtcgcacacgcactgctcgaacgtgtcccgacggagttgcttgacctc
gccgtgctcggaacgattgccgacttagtaccgctcgtcgatgagaaccggttgcttgcg
acaaaaggaattgaagcgttgaatggaagtgagcgtcccggcatcttggcactacgccaa
gtctgtagtttgacggaagacgaactgacggaagaatcggtcgggttcgcattcggtccc
cggatcaatgcggccggtcgactcgattccgcgatgccggcacttgagatgttacttgct
gagacactcgaggaagccgtcgtacttgcgaaccagctcgaccaacaaaataaacaacgg
caagacatcgtcaaacaaatcgcggaagaagcgacagcacttgtcgaagaaaaatatcta
gaagaccgtgtgcttgttgttgacgcggacaactggaacccgggtgtcgtcggcatcgtc
gcctcacgactcgtcgagaaatatcaccgtccggtcatcatgctttgtcatgatgcggag
aaggggacggcgaaagggtctggtcgctcgattgcagccttcgatttatttgccgagttg
acgctatgtgaagacatcttaccgcatttcggtggacacccggcagctgccggcatgaca
ctctcgtcggatgacgtcgtcacgttacgtgaacgcttgaatgcacaggctgccaaacta
ccggatgaagccttcatcgcgacgattgagatcgacttgcggctatgcgtctctgacgtt
tcaatcggattgattgaggaaattggtcgcttagctccgttcggtatggggaatccggca
ccacggatcgtcatcgaagacgctaaaattcgggacatgaaacggatcggccgtgatttg
acccatttgaaggcgctcttatcggatggaacgtcagagttagacgggattggtttcggt
ttcggtgacgcggtagacgaaatttcactactcgctgaagtctccttgatggggagtctg
aacatcaatgagtggaatggttttcggaagccgcaattgatgattcaagatttggctgtc
gccgattatcaattatttgattaccgcggtgggaaaaaaccattaacggacatttttgag
ttgccccaagaacagacgacgctcgttgcattttcggacgagacaaaacaaaaatatgcc
gagcgtccgctgaatggagcgattcatgaaaatgttgtgttcctcgacttaccggagacg
gaagaagcattcttaccgtacttgaaacaggcggagcggatttattgtgcgtttaaggat
gaagggtactacttcgaggcgattccgtcgcgtgaagacttcaagcattactttaattac
ttcgcaaaatgtccacgcgaagagttgcgaatcggactcgttcgtttgtcgaaaacaaga
aaatggtcgaaacgttcgattaactttatgcattcagtgttttcggaactcgattttctt
gttacaatggaggacgggctaccgggtgtgaaccctgacgctgaaaaacgagatttgacg
gaggccgcgacgtacaagcgtcatgaagaacgtcaacgtctcgagcaacaatacatttat
tcgtcactcgctcagttgaaagagcgttttgatactttagtggaagcggcgaagcaggag
gaaatgacatggagttcaaacagcatataa
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