Exiguobacterium sp. N4-1P: A0126_12330
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Entry
A0126_12330 CDS
T10338
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
exi Exiguobacterium sp. N4-1P
Brite
KEGG Orthology (KO) [BR:
exi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
exi03009
]
A0126_12330
Enzymes [BR:
exi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
A0126_12330
Ribosome biogenesis [BR:
exi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A0126_12330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
Cons_hypoth95
MTS
PrmA
Methyltransf_11
Methyltransf_32
PCMT
RrnaAD
Methyltransf_12
N6_N4_Mtase
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
ASI36335
UniProt:
A0A248LAE4
LinkDB
All DBs
Position
complement(2397460..2398818)
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AA seq
452 aa
AA seq
DB search
MIPVQKNDEHVVDIVDLTHDGSGVARIDGYTVFIPGALPTEQVKIRITKTTKSYGFGRII
RQKTKSVDRVEPPCPVYNQCGGCQLQHLSYDAELVFKHNRVRDAFARLAGLEIPVHETIG
MEDPWGYRNKAQVPVAFQSNKLMAGFYQKRSHRIIDMDYCLIQNKENDEAIQAVRKVLAD
LKVPAYDEKKQTGVIRHIMARHGYHTNELMIVLVTKVKQLRGIDKIVAGILKAVPNVTSI
QHNINPEDTNVILGKKNIVLHGPAVIRDQIAGLTYEISPHSFFQVNPLQTEKLYGKALEY
AQLTGEEIVVDAYCGIGSISLSLAQQAKHVYGIEMVPQAIDDARRNAAANGIDNVSFEYG
TAESVMPALVKAGIKPDVIVVDPPRKGCDEEFLRAAAEVAPKRIVYVSCNASTQARDAKL
LAELGYKLMEVTPVDMFPHTTHVESVALFVKM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagtacaaaaaaatgacgagcacgtcgtcgatatcgttgatttgacgcacgac
ggttcaggtgtcgcacgaatcgatggttatacggtcttcattccaggagctttaccgacg
gaacaagtcaaaatcagaattacgaaaacaacgaaatcatatggtttcggacgaattatc
cgtcaaaagacgaagagtgttgaccgtgtcgagccgccatgtcctgtctacaaccaatgt
gggggctgccaactgcaacacttatcatatgatgcagaactcgtctttaagcacaaccgt
gttcgtgatgcatttgcccgcctcgcaggactcgaaattccggtccatgaaacaatcggg
atggaagatccatggggctaccgcaataaagcacaagtcccggtcgctttccagtcgaac
aagttgatggccggtttttaccaaaaacggagccaccgcatcatcgatatggattactgc
ttgattcaaaacaaggaaaatgatgaagcaatccaagcggtccgtaaagtcctcgctgac
ttaaaagtcccagcttacgatgaaaagaaacaaacgggtgtcatccgtcacatcatggca
cgtcacgggtaccatacgaatgaattgatgatcgtcctcgtgacgaaggtcaaacaattg
cgtggtatcgataaaatcgtcgccggcatcttaaaagccgtcccgaacgtgacatcgatt
caacacaacatcaacccagaggatacgaacgtcatcttagggaaaaagaacatcgtcctg
cacggaccagctgtcatccgcgatcaaatcgccggattgacgtatgaaatctcgccacat
tcattcttccaagtcaatccgttgcaaacggagaaactatacggtaaagcactggagtat
gcacaattgacaggtgaagaaatcgtcgtcgacgcgtattgcggtatcggctcgatttca
ttatcacttgcacaacaagcgaaacatgtctacgggattgaaatggttcctcaagcaatc
gacgacgcacgtcgcaacgcagctgcgaacggtatcgacaacgtatcattcgagtatgga
acggctgaatccgtcatgccggcactcgtcaaagctggaatcaaaccggacgtcatcgtc
gttgacccgccgcgtaaaggctgtgacgaagaattcctgcgtgctgcggctgaagtggca
ccaaaacgaatcgtctatgtctcatgtaacgcgtcaactcaagcacgtgacgcgaagttg
cttgctgaactcggttacaagctgatggaagtcacgccagtcgatatgttcccgcatacg
acacacgtcgagagtgtagcccttttcgtaaaaatgtaa
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