Exiguobacterium sp. N4-1P: A0126_14980
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Entry
A0126_14980 CDS
T10338
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
exi Exiguobacterium sp. N4-1P
Brite
KEGG Orthology (KO) [BR:
exi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
exi03032
]
A0126_14980 (gyrB)
03400 DNA repair and recombination proteins [BR:
exi03400
]
A0126_14980 (gyrB)
Enzymes [BR:
exi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A0126_14980 (gyrB)
DNA replication proteins [BR:
exi03032
]
Prokaryotic type
DNA Topoisomerases
A0126_14980 (gyrB)
DNA repair and recombination proteins [BR:
exi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A0126_14980 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ASI36839
LinkDB
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Position
2935091..2937022
Genome browser
AA seq
643 aa
AA seq
DB search
MSNHEDMELEQGYGADQIQVLEGLEAVRKRPGMYIGSTASKGLHHLVWEIVDNSIDEALA
GYCDTIKVTIEPGNSILVEDNGRGIPIDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSG
GLHGVGASVVNALSTKLEVFVKRNEKLYYQSYHRGVPTQDLEIIGTSEETGTMIRFFPDS
EIFQETLEYDYDLLATRLRELAFLNKGLNIVITDDRAEEPITRHFHYEGGIKSYVEHLNR
SKEVVHPEPVYVHGTKDGIEVEVALQYNDGFAANIYSFTNNIPTHEGGTHETGFKTALTR
VINDYAKKFGLMKEADGTLSGEDVREGMTAIVSIKHPNPQFEGQTKTKLGNSDARTATDT
LFSSIFEQFMMENPSNARAIVEKGMMASRARMAAKRARELTRRKGVLEVSSLPGKLADCS
SRDATISEIYIVEGDSAGGSAKSGRDRHFQAILPIRGKILNVEKARLDKILGSNEIRTII
TALGTSIGSEFNIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRPLVEHGYVYIAQP
PLYGIKQGKNITYVHNERELNEALAALPENARYDIQRYKGLGEMDPEQLWETTMDPSGRQ
MLRVELQDAIEADEVFDILMGDQVEPRRDFIQSHAHYVKNLDI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcatgaagatatggaattggaacaagggtacggtgccgatcagattcaggta
cttgaaggtcttgaagccgttcgaaaacgtccaggtatgtatattggatcaaccgcgtcg
aaagggctccaccatttagtttgggaaatcgtcgataactcgattgatgaagcactggct
ggatactgtgacacgattaaagtcacgattgaaccagggaactcgattctagttgaggat
aacggtcgggggattccgattgatattcaagaaaaaatgggacgtcctgcagtcgaagtc
attttaacggtcctccatgccggcggtaagtttggtggcggaggctacaaagtatcaggt
ggtcttcacggtgtcggggcttcggtcgtcaatgcgttgtcgacgaagcttgaagtattc
gttaagcggaacgagaagctctattatcaatcgtatcatcgtggtgttccaacacaagat
ctcgaaatcatcgggacttcagaagagacagggacaatgattcgtttcttcccggacagt
gaaatcttccaggaaacactcgaatacgattacgatttacttgcgacacgtttacgtgaa
ctcgctttcttgaataaaggtctgaacatcgtcattacggacgatcgtgcagaagaaccg
attacgcggcacttccattacgaaggtggaatcaagtcgtacgttgaacacttgaaccgc
tcgaaagaagttgttcacccggaaccggtctacgtccacggaacgaaggatggcatcgaa
gtcgaagttgcgcttcaatacaacgatggctttgcagccaacatctattcgtttacgaac
aacattccgacgcatgaaggtggtacgcatgaaacgggctttaagacggcgttgacgcgt
gtcatcaatgactatgcgaagaagttcggtttgatgaaagaagcagacggtacgttgtct
ggggaagacgtccgtgaaggaatgacggcaatcgtctcgatcaaacacccgaacccccaa
ttcgaaggacaaacgaaaacgaagctcggtaactcggatgctcgaacagcgaccgatacg
ttattctcttccatctttgaacagttcatgatggaaaacccgtcgaatgctcgtgcaatc
gtcgaaaaaggaatgatggcctcgcgtgcccggatggcagcgaaacgcgcgcgtgaattg
acacgtcgtaaaggtgtccttgaagtaagttcacttcctggtaaattggccgactgttca
tcgcgggatgcaacgatttcagaaatttatatcgttgagggtgactcagcgggtggttct
gcgaaatcaggtcgtgaccgtcacttccaagcgattttaccgatccgtggtaaaattttg
aacgttgaaaaagcccgtctcgataaaattctcggcagtaacgagatccggacgatcatt
accgcactcggaacgagtatcggttcagaattcaacatcgaaaaagcacggtatcataaa
gtcatcatcatgaccgatgccgacgtcgatggtgcccacatccggacactcctgttgacg
ttcttctaccgttatatgcgtccgctcgtcgagcatggttatgtctatatcgcacaaccg
ccgctatacggaatcaagcaagggaaaaacatcacgtatgtgcataacgaacgtgagctg
aacgaggccttagccgcacttccagaaaacgcgcgttacgacattcagcgttataaaggt
ctcggtgagatggatccagagcaactttgggaaacgacgatggatccgagtggtcgtcaa
atgcttcgggttgaacttcaagatgccatcgaagcggatgaagtattcgatatcttgatg
ggagatcaggtagaaccacgtcgtgactttatccagtcgcacgcgcattacgtgaagaac
ttggatatttaa
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